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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu2334 and Atu2335 are separated by 162 nucleotides
Atu2335 and Atu2336 are separated by 235 nucleotides
Atu2336 and Atu2337 are separated by 78 nucleotides
Atu2337 and Atu2338 are separated by 460 nucleotides
Atu2334: Atu2334 - hypothetical protein, at 2,312,213 to 2,313,121
Atu2334
Atu2335: Atu2335 - hypothetical protein, at 2,313,284 to 2,313,679
Atu2335
Atu2336: Atu2336 - hypothetical protein, at 2,313,915 to 2,314,532
Atu2336
Atu2337: Atu2337 - hypothetical protein, at 2,314,611 to 2,315,507
Atu2337
Atu2338: Atu2338 - hypothetical protein, at 2,315,968 to 2,317,362
Atu2338
Group
Condition
Atu2334
Atu2335
Atu2336
Atu2337
Atu2338
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.0
-2.1
-0.1
-0.0
-0.1
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.2
-2.9
+0.1
+0.1
+0.2
phage
Phage 95.3 + bacteria
-0.1
-1.7
-0.2
-0.3
-0.0
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.0
-2.0
-0.5
+0.4
+0.1
nophagecontrol
No phage control
-0.0
-1.9
+0.1
-0.3
+0.2
in planta
Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.3
-2.1
-0.2
+0.3
+0.0
stress
Chloramphenicol 12.5 ug/mL
-0.0
-2.0
-0.2
+0.2
+0.5
in planta
Bethi_Library_OD0.1
+0.0
-1.5
+0.1
+0.2
-0.1
phage
AgroPhage_E10
+0.1
-1.6
-0.0
-0.0
+0.3
in planta
Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.3
-1.4
+0.1
-0.1
-0.0
stress
Timentin 3.125 ug/mL
-0.0
-1.6
+0.2
+0.3
-0.0
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.2
-1.1
+0.5
+0.1
-0.2
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.1
-1.2
+0.3
+0.2
-0.1
lb_sorghum f72 f505
LB_Sorghum F72 F505
+0.1
-1.5
+0.4
-0.0
+0.2
in planta
Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.1
-1.5
+0.5
-0.1
+0.3
carbon source
methyl-alpha-D-xylopyranoside (C)
-0.0
-1.3
-0.0
-0.0
+0.5
phage
AgroPhage_F04
+0.1
-1.6
+0.4
+0.0
+0.3
phage
AgroPhage_F10
-0.3
-1.1
+0.1
+0.2
+0.5
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.6
-0.3
+0.3
-0.6
+0.5
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.7
-0.7
-0.1
+0.5
+0.1
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.2
+1.1
+0.0
-0.4
-0.2
stress
Chloramphenicol 12.5 ug/mL
-0.0
+1.0
-0.4
+0.3
+0.2
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.0
+0.7
-0.3
+0.5
+0.3
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.4
+1.5
+0.4
-0.1
+0.2
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
+1.3
-0.1
+0.1
+0.3
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.7
+0.9
+0.2
-0.2
+0.3
in planta
Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.3
+1.4
+0.1
+0.2
+0.1
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.0
+1.7
-0.1
+0.5
+0.4
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.1
+2.2
+0.4
+0.1
+0.1
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.0
+2.0
-0.1
+0.4
+0.3
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