Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2307 and Atu2308 are separated by 232 nucleotidesAtu2308 and Atu2309 are separated by 137 nucleotidesAtu2309 and Atu2310 are separated by 281 nucleotidesAtu2310 and Atu2311 overlap by 4 nucleotides Atu2307: Atu2307 - monooxygenase, at 2,282,769 to 2,283,830 Atu2307 Atu2308: Atu2308 - d-beta-hydroxybutyrate dehydrogenase, at 2,284,063 to 2,284,839 Atu2308 Atu2309: Atu2309 - xanthine dehydrogenase, at 2,284,977 to 2,286,446 Atu2309 Atu2310: Atu2310 - xanthine dehydrogenase C-terminal subunit, at 2,286,728 to 2,288,980 Atu2310 Atu2311: Atu2311 - xanthine dehydrogenase chaperone, at 2,288,977 to 2,289,849 Atu2311
Group Condition Atu2307 Atu2308 Atu2309 Atu2310 Atu2311
phage AgroPhage_E04 -0.1 -0.8 -0.3 -0.0 -0.7
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.1 -0.7 -0.6 -0.4
phage AgroPhage_C04 -0.1 -0.9 -0.4 -0.2 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.2 -0.3 -0.2 -0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 -1.0 -0.1 -0.3 +0.0
phage AgroPhage_C10 -0.3 -0.7 +0.1 -0.1 -0.1
nitrogen source DL-2-Aminobutyric (N) +0.1 -0.8 +0.0 -0.1 -0.2
phage AgroPhage_D10 +0.7 -1.2 +0.1 -0.4 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.5 -0.1 -0.4 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.6 +0.0 -0.0 -0.4
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.3 -0.2 -0.0 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -0.0 -0.3 -0.1 +0.6
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.3 -0.6 +0.1 -0.2 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 +0.5 +0.0 +0.2 +0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 -0.1 -0.4 -0.2 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.3 +0.1 -0.2 -0.5
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.5 -0.2 -0.1 +0.4
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.7 -0.1 -0.1 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.4 -0.0 -0.3 +0.3
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 +0.2 +0.0 -0.2 -0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.5 +0.2 -0.1 +0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.6 -0.1 +0.2 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 +0.2 +0.7 +0.2 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 +0.5 +0.1 +0.2 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +0.2 +0.4 +0.1 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +0.8 -0.1 +0.2 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.0 +0.2 +0.3 +0.5 +0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.1 +0.6 +0.1 +0.3
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 +0.7 +0.2 +0.1 -0.1
stress R2A with Chlorate 400 mM +0.1 +0.3 +1.0 +0.9 +0.9
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