Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2298 and Atu2299 are separated by 220 nucleotidesAtu2299 and Atu2300 are separated by 208 nucleotidesAtu2300 and Atu2301 are separated by 133 nucleotidesAtu2301 and Atu2302 are separated by 155 nucleotides Atu2298: Atu2298 - hypothetical protein, at 2,273,418 to 2,273,930 Atu2298 Atu2299: Atu2299 - hypothetical protein, at 2,274,151 to 2,274,759 Atu2299 Atu2300: Atu2300 - GTP-binding protein, at 2,274,968 to 2,276,398 Atu2300 Atu2301: Atu2301 - hypothetical protein, at 2,276,532 to 2,277,203 Atu2301 Atu2302: Atu2302 - hypothetical protein, at 2,277,359 to 2,277,943 Atu2302
Group Condition Atu2298 Atu2299 Atu2300 Atu2301 Atu2302
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.9 -0.6 N.D. N.D. -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.9 -0.7 N.D. N.D. -0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.9 -0.1 N.D. N.D. -0.2
carbon source D-Saccharic potassium salt (C) -0.5 -0.6 N.D. N.D. +0.0
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -0.6 N.D. N.D. +0.2
stress R2A with Cadmium chloride hemipentahydrate 0.02 mM -0.3 -0.3 N.D. N.D. -0.3
carbon source 4-Hydroxybenzoic Acid (C) -0.6 +0.1 N.D. N.D. -0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.3 N.D. N.D. -0.9
nophagecontrol No phage control -0.6 -0.3 N.D. N.D. +0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 +0.2 N.D. N.D. -0.3
no phage P3L4 -0.6 +0.3 N.D. N.D. -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.2 N.D. N.D. -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 +0.3 N.D. N.D. -0.5
stress R2A with molybdate 400 mM +0.3 -0.8 N.D. N.D. +0.0
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.4 +0.5 N.D. N.D. -0.5
phage AgroPhage_E04 +0.6 -0.5 N.D. N.D. -0.5
phage AgroPhage_C04 -1.0 -0.2 N.D. N.D. +0.8
phage AgroPhage_F03 +0.1 -0.7 N.D. N.D. +0.3
phage AgroPhage_D10 -0.1 -0.7 N.D. N.D. +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 +0.5 N.D. N.D. +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.7 N.D. N.D. -0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -0.0 N.D. N.D. +0.7
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 +0.8 N.D. N.D. -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +0.6 N.D. N.D. +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 +1.0 N.D. N.D. -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 +0.4 +0.5 N.D. N.D. +0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.8 N.D. N.D. -0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 -0.1 N.D. N.D. +0.4
phage AgroPhage_C10 +0.2 +0.1 N.D. N.D. +0.9
phage phage 95.1 +0.4 +0.5 N.D. N.D. +0.5
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