Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2291 and Atu2292 are separated by 240 nucleotidesAtu2292 and Atu2293 are separated by 116 nucleotidesAtu2293 and Atu2294 are separated by 216 nucleotidesAtu2294 and Atu2295 overlap by 4 nucleotides Atu2291: Atu2291 - hypothetical protein, at 2,264,840 to 2,265,787 Atu2291 Atu2292: Atu2292 - adenine deaminase, at 2,266,028 to 2,267,755 Atu2292 Atu2293: Atu2293 - hypothetical protein, at 2,267,872 to 2,268,423 Atu2293 Atu2294: Atu2294 - aminoglycoside N6'-acetyltransferase, at 2,268,640 to 2,269,107 Atu2294 Atu2295: Atu2295 - alpha-glucosidase, at 2,269,104 to 2,270,768 Atu2295
Group Condition Atu2291 Atu2292 Atu2293 Atu2294 Atu2295
stress R2A with Sisomicin 0.001 mM -0.1 -0.0 +0.1 -6.9 -4.5
stress R2A with Sisomicin 0.001 mM -0.0 -0.1 +0.2 -6.1 -4.5
stress R2A with Gentamicin 0.00125 mM -0.1 -0.2 -0.4 -4.9 -3.6
stress R2A with Gentamicin 0.00125 mM +0.1 +0.0 -0.6 -4.3 -3.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.1 -1.9 -0.6 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.4 -0.5 -0.1 -0.7
Atjh2 -0.1 +0.2 -1.3 -0.6 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.4 -0.5 +0.1 -0.4
stress Erythromycin 12.5 ug/mL +0.0 -0.1 -0.8 -0.3 -0.4
Atjh2 +0.2 -0.1 -1.0 -0.3 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.3 -0.1 -1.2 -0.0 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.2 -0.0 -1.1 -0.2 +0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.5 -0.4 -0.8 -0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 +0.2 -0.8 +0.2 +0.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.2 -0.4 +0.5 -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.4 +0.5 -0.1 -0.6
stress Chloramphenicol 12.5 ug/mL +0.0 -0.4 -0.8 +0.8 -0.1
in planta Bethi_Library_OD0.01 -0.2 +0.0 +0.7 -0.5 -0.3
stress Chloramphenicol 12.5 ug/mL -0.6 -0.6 +0.7 -0.1 +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -0.4 +0.2 +0.7 -0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.0 +0.9 -0.8 +0.0
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.0 +0.8 -0.5 -0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 +0.1 +1.3 +0.0 -0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.1 +0.8 +0.0 -0.4
nitrogen source DL-2-Aminobutyric (N) -0.8 +0.2 -0.1 +1.4 +0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.1 +0.3 +1.0 -0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.6 -0.3 +0.8 -0.3
no phage P1L5 +0.3 +0.1 +0.4 +0.6 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.2 +0.7 +0.5 -0.5
phage AgroPhage_E10 +0.3 +0.1 +0.9 -0.2 +0.2
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