Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2290 and Atu2291 overlap by 4 nucleotidesAtu2291 and Atu2292 are separated by 240 nucleotidesAtu2292 and Atu2293 are separated by 116 nucleotidesAtu2293 and Atu2294 are separated by 216 nucleotides Atu2290: Atu2290 - probable acetyltransferase, at 2,264,334 to 2,264,843 Atu2290 Atu2291: Atu2291 - hypothetical protein, at 2,264,840 to 2,265,787 Atu2291 Atu2292: Atu2292 - adenine deaminase, at 2,266,028 to 2,267,755 Atu2292 Atu2293: Atu2293 - hypothetical protein, at 2,267,872 to 2,268,423 Atu2293 Atu2294: Atu2294 - aminoglycoside N6'-acetyltransferase, at 2,268,640 to 2,269,107 Atu2294
Group Condition Atu2290 Atu2291 Atu2292 Atu2293 Atu2294
stress R2A with Sisomicin 0.001 mM -0.2 -0.1 -0.0 +0.1 -6.9
stress R2A with Sisomicin 0.001 mM -0.0 -0.0 -0.1 +0.2 -6.1
stress R2A with Gentamicin 0.00125 mM -0.2 -0.1 -0.2 -0.4 -4.9
stress R2A with Gentamicin 0.00125 mM -0.0 +0.1 +0.0 -0.6 -4.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -0.2 -0.1 -1.9 -0.6
Atjh2 -0.1 -0.1 +0.2 -1.3 -0.6
phage AgroPhage_F03 -0.8 +0.2 -0.3 -0.5 -0.2
Atjh2 -0.1 +0.2 -0.1 -1.0 -0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.1 +0.3 -0.1 -1.2 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.4 -0.4 -0.5 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 -0.2 -0.2 -0.9 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 -0.1 -1.2 +0.0
stress Chloramphenicol 12.5 ug/mL -0.2 -0.6 -0.6 +0.7 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.5 -0.1 -0.1 -0.9 +0.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.0 +0.0 +0.9 -0.8
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.1 +0.5 -0.4 -0.8
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.1 +0.3 -0.4 -0.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.9 -0.1 +0.0 -0.2 -0.6
stress Chloramphenicol 12.5 ug/mL +0.5 +0.0 -0.4 -0.8 +0.8
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 -0.3 +0.3 -0.5 +0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.0 -0.1 -0.1 +1.0
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 -0.3 -0.4 +0.2 +0.7
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -0.6 -0.2 +0.6 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.1 -0.0 -0.1 -0.3 -0.4
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.6 -0.3 +0.1 +1.3 +0.0
nitrogen source DL-2-Aminobutyric (N) -0.1 -0.8 +0.2 -0.1 +1.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.3 +0.6 -0.3 +0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 -0.0 -0.1 +1.0 +0.4
phage AgroPhage_E10 +0.3 +0.3 +0.1 +0.9 -0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.3 +0.2 +0.7 +0.5
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