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Cofit
Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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500 nt
Atu2288 and Atu2289 are separated by 282 nucleotides
Atu2289 and Atu2290 overlap by 1 nucleotides
Atu2290 and Atu2291 overlap by 4 nucleotides
Atu2291 and Atu2292 are separated by 240 nucleotides
Atu2288: Atu2288 - hypothetical protein, at 2,260,960 to 2,261,862
Atu2288
Atu2289: Atu2289 - anthranilate synthase component I and II, at 2,262,145 to 2,264,334
Atu2289
Atu2290: Atu2290 - probable acetyltransferase, at 2,264,334 to 2,264,843
Atu2290
Atu2291: Atu2291 - hypothetical protein, at 2,264,840 to 2,265,787
Atu2291
Atu2292: Atu2292 - adenine deaminase, at 2,266,028 to 2,267,755
Atu2292
Group
Condition
Atu2288
Atu2289
Atu2290
Atu2291
Atu2292
carbon source
Sucrose (C)
+0.0
-8.0
+0.0
-0.1
-0.1
carbon source
L-Sorbose (C)
-0.2
-7.6
-0.2
-0.0
-0.1
carbon source
D-Quinic (C)
-0.0
-8.0
+0.1
-0.0
-0.1
carbon source
Protocatechuic Acid (C)
-0.1
-7.7
+0.0
-0.1
-0.0
carbon source
D-Trehalose (C)
+0.1
-7.7
-0.2
-0.0
-0.1
carbon source
D-Glucuronic gamma lactone (C)
-0.2
-7.3
-0.1
-0.1
-0.2
carbon source
D-Cellobiose (C)
+0.1
-7.8
+0.1
-0.1
-0.1
carbon source
Cellotetraose (C)
-0.0
-7.6
-0.1
-0.1
-0.0
carbon source
D-Mannose (C)
+0.0
-7.9
+0.2
-0.1
-0.0
carbon source
Beta-Lactose (C)
+0.1
-7.7
+0.0
-0.1
-0.0
carbon source
Protocatechuic Acid (C)
-0.0
-7.8
+0.1
+0.1
-0.0
carbon source
D-Glucose (C)
-0.3
-7.5
+0.1
+0.0
-0.0
carbon source
D-Maltose (C)
-0.2
-7.6
+0.1
-0.1
+0.0
carbon source
methyl-beta-D-xylopyranoside (C)
-0.0
-7.3
-0.2
+0.1
-0.2
carbon source
D-Fructose (C)
+0.0
-7.7
+0.2
-0.2
-0.0
carbon source
D-Glucose-6-Phosphate (C)
+0.1
-7.2
-0.4
-0.0
-0.0
carbon source
L-Arabinose (C)
+0.1
-7.9
+0.2
+0.1
+0.1
carbon source
L-Galactose (C)
-0.1
-7.4
-0.1
+0.2
-0.1
carbon source
D-Maltose (C)
-0.1
-7.4
+0.2
-0.3
+0.0
carbon source
m-Inositol (C)
-0.0
-7.6
+0.1
+0.1
-0.0
carbon source
Cellotetraose (C)
-0.0
-7.4
-0.0
+0.1
+0.1
carbon source
D-Mannitol (C)
-0.0
-7.5
+0.3
+0.0
+0.0
carbon source
D-Mannitol (C)
+0.0
-7.8
+0.4
+0.1
+0.1
carbon source
D-Mannose (C)
-0.1
-7.7
+0.4
+0.2
+0.0
carbon source
D-Fructose (C)
+0.1
-7.3
-0.1
+0.3
-0.1
carbon source
succinate (C)
+0.1
-7.6
+0.4
-0.1
+0.1
carbon source
L-Arabinose (C)
-0.1
-7.3
+0.2
+0.1
+0.0
carbon source
D-Quinic (C)
+0.2
-7.5
+0.1
+0.1
-0.0
carbon source
D-Glucose (C)
-0.0
-7.2
+0.4
+0.0
+0.1
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.3
-6.6
+0.5
-0.1
-0.1
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