Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2284 and Atu2285 are separated by 29 nucleotidesAtu2285 and Atu2286 are separated by 93 nucleotidesAtu2286 and Atu2287 are separated by 356 nucleotidesAtu2287 and Atu2288 are separated by 52 nucleotides Atu2284: Atu2284 - hypothetical protein, at 2,255,792 to 2,256,949 Atu2284 Atu2285: Atu2285 - transcriptional regulator, LuxR family, at 2,256,979 to 2,257,695 Atu2285 Atu2286: Atu2286 - hypothetical protein, at 2,257,789 to 2,258,310 Atu2286 Atu2287: Atu2287 - outer membrane heme receptor, at 2,258,667 to 2,260,907 Atu2287 Atu2288: Atu2288 - hypothetical protein, at 2,260,960 to 2,261,862 Atu2288
Group Condition Atu2284 Atu2285 Atu2286 Atu2287 Atu2288
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.3 -3.0 -0.2 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 +0.0 -1.1 -0.1 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -0.3 -1.7 -0.0 -0.4
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.0 -1.9 -0.1 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.0 -0.1 -1.3 -0.3 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.4 -1.7 +0.1 +0.2
carbon source Melibiose (C) -0.3 +0.0 -1.3 -0.0 +0.2
nitrogen source Putrescine (N) +0.2 +0.0 -1.4 +0.1 -0.0
stress Rosmarinic 5 mM +0.0 +0.2 -1.5 +0.1 +0.0
carbon source m-Inositol (C) +0.0 +0.2 -1.4 +0.1 -0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 -0.5 -0.9 +0.1 -0.3
carbon source D-glutamine (C) +0.3 -0.1 -1.3 +0.0 +0.0
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.3 -0.9 +0.4 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.1 -1.5 +0.1 +0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.1 -0.8 +0.0 -0.3
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.2 -1.0 +0.2 +0.2
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.1 +0.2 -1.1 +0.1 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.1 -1.4 +0.5 -0.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.3 -1.0 +0.0 +0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.4 -0.6 +0.3 +0.1
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 +0.3 +1.1 -0.1 +0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.1 +1.3 +0.1 -0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.3 +1.3 +0.2 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.4 +1.9 +0.2 -0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.5 +1.6 +0.1 +0.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.2 +1.1 +0.2 +0.1
no phage P3L5 +0.1 +0.2 +1.3 +0.1 -0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.1 +1.7 +0.1 +0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.2 +1.4 +0.2 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.2 +1.8 +0.2 +0.5
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