Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2283 and Atu2284 are separated by 238 nucleotidesAtu2284 and Atu2285 are separated by 29 nucleotidesAtu2285 and Atu2286 are separated by 93 nucleotidesAtu2286 and Atu2287 are separated by 356 nucleotides Atu2283: Atu2283 - pseudoazurin, at 2,255,101 to 2,255,553 Atu2283 Atu2284: Atu2284 - hypothetical protein, at 2,255,792 to 2,256,949 Atu2284 Atu2285: Atu2285 - transcriptional regulator, LuxR family, at 2,256,979 to 2,257,695 Atu2285 Atu2286: Atu2286 - hypothetical protein, at 2,257,789 to 2,258,310 Atu2286 Atu2287: Atu2287 - outer membrane heme receptor, at 2,258,667 to 2,260,907 Atu2287
Group Condition Atu2283 Atu2284 Atu2285 Atu2286 Atu2287
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.3 -0.3 -3.0 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 +0.5 -0.3 -1.7 -0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.4 -0.4 -1.7 +0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.2 -0.0 -1.9 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.3 -0.1 -1.5 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.4 +0.0 -1.1 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 -0.0 -0.1 -1.3 -0.3
stress Rosmarinic 5 mM -0.1 +0.0 +0.2 -1.5 +0.1
carbon source m-Inositol (C) -0.2 +0.0 +0.2 -1.4 +0.1
nitrogen source Putrescine (N) +0.0 +0.2 +0.0 -1.4 +0.1
carbon source D-Glucose (C) +0.2 +0.1 +0.1 -1.4 -0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 +0.4 -0.1 -0.8 +0.1
carbon source D-glutamine (C) +0.1 +0.3 -0.1 -1.3 +0.0
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.1 -0.3 -0.9 +0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +0.6 -0.5 -0.9 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.5 +0.1 -1.4 +0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.4 +0.4 -0.6 +0.3
no phage P2L4 -0.4 -0.1 -0.2 +1.1 +0.0
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -0.3 +0.3 +0.8 -0.0
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.2 +0.3 +1.1 -0.1
no phage P3L5 -0.6 +0.1 +0.2 +1.3 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.0 +0.1 -0.2 +1.5 -0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.2 -0.5 +1.6 +0.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.1 -0.3 +1.2 +0.2
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.3 -0.2 +1.1 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.2 -0.2 +1.8 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.1 -0.4 +1.9 +0.2
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.2 -0.1 +1.7 +0.1
nitrogen source DL-2-Aminobutyric (N) +1.3 -0.2 -0.2 +1.1 -0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +0.5 +0.2 +1.4 +0.2
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