Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1014 experiments or choose conditions or try the comparative fitness browser

500 ntAtu2275 and Atu2276 are separated by 67 nucleotidesAtu2276 and Atu2277 are separated by 286 nucleotidesAtu2277 and Atu2278 are separated by 119 nucleotidesAtu2278 and Atu2279 are separated by 542 nucleotides Atu2275: Atu2275 - hypothetical protein, at 2,246,920 to 2,247,321 Atu2275 Atu2276: Atu2276 - ABC transporter, substrate binding protein (branched chain amino acid), at 2,247,389 to 2,248,495 Atu2276 Atu2277: Atu2277 - adenylate cyclase protein, at 2,248,782 to 2,249,957 Atu2277 Atu2278: Atu2278 - transcriptional regulator, ArsR family, at 2,250,077 to 2,250,397 Atu2278 Atu2279: Atu2279 - ABC transporter, nucleotide binding/ATPase protein (proline/glycine betaine), at 2,250,940 to 2,251,986 Atu2279
Group Condition Atu2275 Atu2276 Atu2277 Atu2278 Atu2279
nitrogen source Choline chloride (N) +0.1 +0.0 +0.0 -0.0 -2.9
nitrogen source Choline chloride (N) +0.1 +0.0 +0.2 +0.2 -2.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.0 +0.4 +0.7 -1.1 -1.2
phage AgroPhage_E10 -1.0 -0.1 -0.4 -0.5 +0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.8 -0.1 +0.5 -0.4 -0.7
stress Timentin 6.25 ug/mL -0.2 -0.0 +0.1 +0.1 -1.4
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 -0.8 -0.0 -0.1 -0.9
stress Timentin 6.25 ug/mL +0.3 +0.2 -0.1 -0.2 -1.2
phage AgroPhage_E04 -0.5 -0.4 +0.1 -0.6 +0.5
phage AgroPhage_F10 -0.7 -0.0 -0.0 -0.5 +0.6
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 +0.6 +0.0 -0.3 -0.5
phage AgroPhage_C04 +0.2 +0.8 -0.3 -0.5 -0.4
phage AgroPhage_C10 -0.8 +0.4 +0.2 -0.2 +0.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 +0.6 +0.2 -0.2 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.1 +0.8 -0.7 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.5 +0.2 -0.7 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.0 +0.3 +0.8 -0.5 +0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.3 +1.0 -0.3 -0.3
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.9 +0.1 +0.1 -0.2 -0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.0 +0.7 +1.1 -0.2 -0.2
stress R2A with m-arsenite 0.8 mM +0.4 +0.7 -0.2 -0.6 +0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.2 +0.5 +0.1 -0.6
phage AgroPhage_F04 +0.5 +0.3 -0.1 -0.4 +0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.5 +1.3 -0.3 -0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.6 +0.8 -0.1 +0.1
stress R2A with m-arsenite 0.8 mM +0.1 +1.0 -0.2 -0.2 +0.5
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 +0.7 +0.4 -0.1 -0.3
stress R2A with Vancomycin 0.009 mM +0.3 +0.3 +0.2 +0.6 +0.9
nitrogen source DL-2-Aminobutyric (N) -0.4 +1.4 +0.1 -0.3 +1.5
stress R2A with Vancomycin 0.009 mM +0.0 +0.1 -0.0 +0.8 +1.5
remove
Atu2275
plot		 remove
Atu2276
plot		 remove
Atu2277		 remove
Atu2278
plot		 remove
Atu2279
plot