Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu8176 and Atu2270 are separated by 106 nucleotidesAtu2270 and Atu2271 are separated by 234 nucleotidesAtu2271 and Atu2272 are separated by 100 nucleotidesAtu2272 and Atu2273 are separated by 25 nucleotides Atu8176: Atu8176 - hypothetical protein, at 2,242,707 to 2,242,964 Atu8176 Atu2270: Atu2270 - ATP-dependent Clp protease, proteolytic subunit, at 2,243,071 to 2,243,652 Atu2270 Atu2271: Atu2271 - urease accessory protein, at 2,243,887 to 2,244,477 Atu2271 Atu2272: Atu2272 - hypothetical protein, at 2,244,578 to 2,245,324 Atu2272 Atu2273: Atu2273 - hypothetical protein, at 2,245,350 to 2,245,814 Atu2273
Group Condition Atu8176 Atu2270 Atu2271 Atu2272 Atu2273
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -3.0 -0.3 +0.1 -0.4 -1.3
phage AgroPhage_C04 -1.7 -2.4 -0.1 +0.1 -0.8
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.5 -4.5 -0.3 +0.1 +1.4
phage AgroPhage_E10 -4.8 +0.1 -0.1 +0.1 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.9 -4.4 +0.5 -0.4 -1.0
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -3.4 -0.2 -0.4 -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -2.3 -0.1 -0.5 +0.0
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.2 +0.8 -1.2 -0.2 -1.4
stress Chloramphenicol 12.5 ug/mL -0.7 +0.1 -0.6 -0.5 -1.4
stress Chloramphenicol 12.5 ug/mL -0.5 -0.2 +0.1 -0.6 -1.8
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 -1.7 -0.3 -0.2 -0.6
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.1 -1.6 -0.9 -0.3 -0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.7 -2.4 +0.3 -0.4 -1.2
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -2.1 -0.2 -0.2 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 -1.8 -0.4 -0.1 -0.3
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 -1.2 -0.1 -0.6 -0.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -1.0 -0.9 -0.4 +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.0 +0.7 -0.5 -0.8 -2.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.2 -0.8 -0.5 +0.1 -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.6 +0.6 +0.4 +0.4
Atjh14 +0.3 +1.7 -0.8 -1.5 +0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.9 +0.6 +0.5 -0.6
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.3 -0.1 +0.6 -0.4 -0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.6 +0.8 -0.2 -1.0 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.3 -0.7 +1.0 -0.2 +0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.9 +1.2 +0.7 -0.7 -0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +1.0 +0.7 +0.3 +0.5
Atjh15 +0.8 +1.7 +0.2 +0.2 +0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +2.0 +0.2 +0.4 +0.5
nitrogen source DL-2-Aminobutyric (N) -0.7 +5.1 +0.3 -0.5 -0.7
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