Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2266 and Atu2267 are separated by 72 nucleotidesAtu2267 and Atu2268 overlap by 4 nucleotidesAtu2268 and Atu8176 are separated by 225 nucleotidesAtu8176 and Atu2270 are separated by 106 nucleotides Atu2266: Atu2266 - hypothetical protein, at 2,240,176 to 2,241,258 Atu2266 Atu2267: Atu2267 - hypothetical protein, at 2,241,331 to 2,241,975 Atu2267 Atu2268: Atu2268 - ECF family sigma factor, at 2,241,972 to 2,242,481 Atu2268 Atu8176: Atu8176 - hypothetical protein, at 2,242,707 to 2,242,964 Atu8176 Atu2270: Atu2270 - ATP-dependent Clp protease, proteolytic subunit, at 2,243,071 to 2,243,652 Atu2270
Group Condition Atu2266 Atu2267 Atu2268 Atu8176 Atu2270
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.6 +0.1 -1.5 -4.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -2.2 -0.8 +0.9 -4.4
phage AgroPhage_E10 +0.4 +0.2 +0.2 -4.8 +0.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -1.0 +0.3 -3.0 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 -2.0 -0.2 +1.7 -2.4
phage AgroPhage_C04 +0.1 +0.6 +0.1 -1.7 -2.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.9 +0.4 -0.5 -2.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.8 -1.4 -0.5 -0.0 -0.4
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.4 +0.0 +0.5 -3.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -2.6 -0.2 +1.2 -0.8
carbon source D-Saccharic potassium salt (C) -0.0 -1.2 +0.1 -0.2 -1.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -1.1 +0.2 -0.5 -1.0
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.5 +0.0 +0.4 -2.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 -0.8 -0.1 -1.2 +0.8
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -1.4 -0.3 +0.5 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.0 -0.5 -0.4 +0.6 -1.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -1.9 -0.5 +1.3 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.5 -0.2 +0.6 -1.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 -0.9 +0.0 +0.6 -1.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.0 -0.3 +0.1 +0.7 -1.8
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -1.2 -0.5 +0.8 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.2 -1.2 -0.5 +0.8 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.7 -0.3 +1.3 -0.7
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -2.0 -0.2 -0.0 +2.0
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.1 -0.1 +1.2 -1.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -2.0 -0.5 +1.6 +0.8
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -1.1 -0.2 +1.0 +0.7
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -1.5 -0.0 +1.0 +0.7
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -1.2 +0.1 +0.9 +1.2
nitrogen source DL-2-Aminobutyric (N) +0.9 -0.4 -0.1 -0.7 +5.1
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