Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu8175 and Atu2257 are separated by 1 nucleotidesAtu2257 and Atu2258 are separated by 89 nucleotidesAtu2258 and Atu2259 are separated by 9 nucleotidesAtu2259 and Atu2260 are separated by 89 nucleotides Atu8175: Atu8175 - putative transmembrane protein, RNA-binding region RNP-1 (RNA recognition motif), at 2,226,253 to 2,229,063 Atu8175 Atu2257: Atu2257 - hypothetical protein, at 2,229,065 to 2,231,149 Atu2257 Atu2258: Atu2258 - acetyltransferase, at 2,231,239 to 2,231,652 Atu2258 Atu2259: Atu2259 - MFS permease, at 2,231,662 to 2,232,975 Atu2259 Atu2260: Atu2260 - acetyltransferase, at 2,233,065 to 2,233,634 Atu2260
Group Condition Atu8175 Atu2257 Atu2258 Atu2259 Atu2260
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -0.6 -1.4 N.D.
phage AgroPhage_C04 N.D. N.D. +0.0 -1.3 N.D.
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.5 -0.7 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. -0.8 -0.4 N.D.
nophagecontrol No phage control N.D. N.D. -0.6 -0.5 N.D.
stress R2A with Tetracycline 0.002 mM N.D. N.D. -0.1 -1.0 N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. -0.7 -0.2 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.8 -0.2 N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.2 -0.9 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. +0.2 -0.7 N.D.
carbon source Asolectin from soybean (C) N.D. N.D. +0.3 -0.8 N.D.
carbon source D-Saccharic potassium salt (C) N.D. N.D. -0.7 +0.2 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -1.0 +0.6 N.D.
carbon source D-Cellobiose (C) N.D. N.D. -0.6 +0.4 N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. +0.4 -0.5 N.D.
phage AgroPhage_E04 N.D. N.D. -0.5 +0.5 N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.5 +0.4 N.D.
phage AgroPhage_D04 N.D. N.D. -0.5 +0.5 N.D.
phage AgroPhage_F04 N.D. N.D. -0.6 +0.6 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.5 -0.4 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. +0.5 -0.4 N.D.
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. +0.7 -0.3 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.3 +0.8 N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.9 -0.3 N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.9 -0.2 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +1.3 +0.0 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.8 +0.6 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.3 +2.0 N.D.
nitrogen source DL-2-Aminobutyric (N) N.D. N.D. +2.4 -0.2 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +1.8 +1.0 N.D.
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