Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2251 and Atu2252 overlap by 4 nucleotidesAtu2252 and Atu2253 are separated by 174 nucleotidesAtu2253 and Atu2254 are separated by 36 nucleotidesAtu2254 and Atu8175 overlap by 4 nucleotides Atu2251: Atu2251 - NTP pyrophosphohydrolase, MutT family, at 2,222,862 to 2,223,494 Atu2251 Atu2252: Atu2252 - hypothetical protein, at 2,223,491 to 2,224,120 Atu2252 Atu2253: Atu2253 - MoxR family protein, at 2,224,295 to 2,225,305 Atu2253 Atu2254: Atu2254 - hypothetical protein, at 2,225,342 to 2,226,256 Atu2254 Atu8175: Atu8175 - putative transmembrane protein, RNA-binding region RNP-1 (RNA recognition motif), at 2,226,253 to 2,229,063 Atu8175
Group Condition Atu2251 Atu2252 Atu2253 Atu2254 Atu8175
carbon source Phloretic Acid (C) -0.1 -1.4 N.D. N.D. N.D.
carbon source Phloretic Acid (C) -0.0 -1.4 N.D. N.D. N.D.
phage AgroPhage_C04 -0.6 -0.4 N.D. N.D. N.D.
stress R2A with hypochlorite 6.25 mM -0.6 -0.2 N.D. N.D. N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.4 N.D. N.D. N.D.
carbon source Myristic (C) +0.0 -0.8 N.D. N.D. N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.2 N.D. N.D. N.D.
carbon source methyl-alpha-D-xylopyranoside (C) -0.4 -0.2 N.D. N.D. N.D.
carbon source Myristic (C) +0.2 -0.7 N.D. N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.5 N.D. N.D. N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 +0.2 N.D. N.D. N.D.
stress R2A with Ferric chloride 0.1 mM +0.2 -0.5 N.D. N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -0.5 N.D. N.D. N.D.
r2a_control R2A control +0.3 -0.4 N.D. N.D. N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -0.4 N.D. N.D. N.D.
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.4 N.D. N.D. N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -0.4 N.D. N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 -0.3 N.D. N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -0.2 N.D. N.D. N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 -0.3 N.D. N.D. N.D.
stress R2A with Cesium chloride 1.75 mM +0.4 -0.2 N.D. N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -0.2 N.D. N.D. N.D.
phage AgroPhage_D10 +0.8 -0.4 N.D. N.D. N.D.
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 -0.1 N.D. N.D. N.D.
lb LB +0.4 +0.2 N.D. N.D. N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 +0.1 N.D. N.D. N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +0.6 N.D. N.D. N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.2 N.D. N.D. N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.5 N.D. N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +0.2 N.D. N.D. N.D.
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