Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1014 experiments or choose conditions or try the comparative fitness browser

500 ntAtu2246 and Atu2247 are separated by 126 nucleotidesAtu2247 and Atu2248 are separated by 122 nucleotidesAtu2248 and Atu2249 are separated by 113 nucleotidesAtu2249 and Atu2250 are separated by 26 nucleotides Atu2246: Atu2246 - hypothetical protein, at 2,219,581 to 2,219,856 Atu2246 Atu2247: Atu2247 - coproporphyrinogen III oxidase, at 2,219,983 to 2,220,894 Atu2247 Atu2248: Atu2248 - hypothetical protein, at 2,221,017 to 2,221,283 Atu2248 Atu2249: Atu2249 - hypothetical protein, at 2,221,397 to 2,221,582 Atu2249 Atu2250: Atu2250 - poly(A) polymerase, at 2,221,609 to 2,222,865 Atu2250
Group Condition Atu2246 Atu2247 Atu2248 Atu2249 Atu2250
phage AgroPhage_E04 N.D. N.D. -0.0 -4.0 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -0.4 -3.3 N.D.
phage AgroPhage_E10 N.D. N.D. -0.4 -3.2 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.5 -3.6 N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.5 -3.6 N.D.
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. -0.4 -2.4 N.D.
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.3 -2.8 N.D.
in planta Bethi_Library_OD1.0 N.D. N.D. -0.1 -2.1 N.D.
in planta Bethi_Library_OD0.01 N.D. N.D. -0.0 -2.1 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -0.3 -1.7 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.4 -2.4 N.D.
phage phage 100.3 N.D. N.D. -0.1 -1.8 N.D.
carbon source Asolectin from soybean (C) N.D. N.D. +0.2 -2.1 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -0.0 -1.8 N.D.
carbon source D-Sorbitol (C) N.D. N.D. -0.3 -1.5 N.D.
lb LB N.D. N.D. -0.3 -1.4 N.D.
carbon source D-Saccharic potassium salt (C) N.D. N.D. -0.4 -1.3 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.4 -1.9 N.D.
Atjh2 N.D. N.D. +0.5 -1.9 N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. +0.1 -1.5 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. +0.2 -1.6 N.D.
nitrogen source DL-2-Aminobutyric (N) N.D. N.D. +0.6 -1.9 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +1.0 -1.1 N.D.
lb_maize LB_Maize N.D. N.D. -0.6 +1.1 N.D.
stress R2A with EDTA 0.25 mM N.D. N.D. -0.6 +1.2 N.D.
Atjh15 N.D. N.D. +0.8 +0.8 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. +0.9 +0.9 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.2 +1.7 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.2 +2.3 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. -0.4 +3.7 N.D.
remove
Atu2246
plot		 remove
Atu2247
plot		 remove
Atu2248		 remove
Atu2249
plot		 remove
Atu2250
plot