Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu2245 and Atu2246 are separated by 59 nucleotidesAtu2246 and Atu2247 are separated by 126 nucleotidesAtu2247 and Atu2248 are separated by 122 nucleotidesAtu2248 and Atu2249 are separated by 113 nucleotides Atu2245: Atu2245 - Na+/Pi-cotransporter, at 2,217,869 to 2,219,521 Atu2245 Atu2246: Atu2246 - hypothetical protein, at 2,219,581 to 2,219,856 Atu2246 Atu2247: Atu2247 - coproporphyrinogen III oxidase, at 2,219,983 to 2,220,894 Atu2247 Atu2248: Atu2248 - hypothetical protein, at 2,221,017 to 2,221,283 Atu2248 Atu2249: Atu2249 - hypothetical protein, at 2,221,397 to 2,221,582 Atu2249
Group Condition Atu2245 Atu2246 Atu2247 Atu2248 Atu2249
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.6 N.D. N.D. -0.4 -3.3
phage AgroPhage_E04 -0.1 N.D. N.D. -0.0 -4.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 N.D. N.D. +0.5 -3.6
phage AgroPhage_E10 +0.2 N.D. N.D. -0.4 -3.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 N.D. N.D. +0.5 -3.6
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.0 N.D. N.D. -0.4 -2.4
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.2 N.D. N.D. -0.3 -1.0
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 N.D. N.D. +0.3 -2.8
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.6 N.D. N.D. -0.1 -0.7
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.1 N.D. N.D. -0.8 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 N.D. N.D. -0.3 -1.7
carbon source Asolectin from soybean (C) +0.1 N.D. N.D. +0.2 -2.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 N.D. N.D. +0.4 -1.9
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 N.D. N.D. +0.4 -2.4
nitrogen source DL-2-Aminobutyric (N) -0.0 N.D. N.D. +0.6 -1.9
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.1 N.D. N.D. +0.5 -0.6
lb_maize LB_Maize -1.5 N.D. N.D. -0.6 +1.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.5 N.D. N.D. -0.0 +0.8
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.4 N.D. N.D. -0.1 +0.9
lb control LB control -1.2 N.D. N.D. +0.3 +0.6
lb LB -1.1 N.D. N.D. -0.1 +0.9
lb_maize LB_Maize -1.2 N.D. N.D. +0.2 +0.7
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.2 N.D. N.D. +0.0 +0.9
lb control LB control -1.1 N.D. N.D. +0.2 +0.7
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 N.D. N.D. +1.0 -1.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.0 N.D. N.D. +0.1 +1.3
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 N.D. N.D. +0.2 +1.7
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.0 N.D. N.D. +1.6 +0.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 N.D. N.D. -0.2 +2.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.1 N.D. N.D. -0.4 +3.7
remove
Atu2245
plot		 remove
Atu2246
plot		 remove
Atu2247		 remove
Atu2248
plot		 remove
Atu2249
plot