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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu2242 and Atu2243 are separated by 379 nucleotides
Atu2243 and Atu2244 are separated by 235 nucleotides
Atu2244 and Atu2245 are separated by 173 nucleotides
Atu2245 and Atu2246 are separated by 59 nucleotides
Atu2242: Atu2242 - ABC transporter, nucleotide binding/ATPase protein, at 2,213,869 to 2,215,719
Atu2242
Atu2243: Atu2243 - hypothetical protein, at 2,216,099 to 2,216,974
Atu2243
Atu2244: Atu2244 - tRNA/rRNA methyltransferase, at 2,217,210 to 2,217,695
Atu2244
Atu2245: Atu2245 - Na+/Pi-cotransporter, at 2,217,869 to 2,219,521
Atu2245
Atu2246: Atu2246 - hypothetical protein, at 2,219,581 to 2,219,856
Atu2246
Group
Condition
Atu2242
Atu2243
Atu2244
Atu2245
Atu2246
stress
R2A with Gentamicin 0.00125 mM
-4.1
-0.0
+0.3
-0.0
N.D.
stress
R2A with Tetracycline 0.002 mM
-3.3
-0.0
-0.4
+0.1
N.D.
stress
R2A with Gentamicin 0.00125 mM
-3.2
+0.0
+0.1
-0.2
N.D.
stress
R2A with Tetracycline 0.002 mM
-2.6
+0.2
-0.1
-0.0
N.D.
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.1
+0.0
-0.3
-1.5
N.D.
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.1
-0.1
-0.1
-1.6
N.D.
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
-0.2
-0.0
-1.6
N.D.
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.2
+0.0
-0.0
-1.4
N.D.
lb_maize
LB_Maize
+0.1
+0.0
-0.2
-1.5
N.D.
lb_maize
LB_Maize
-0.1
-0.1
-0.1
-1.2
N.D.
lb control
LB control
+0.0
-0.1
-0.2
-1.3
N.D.
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.3
+0.1
-0.2
-1.1
N.D.
lb_maize
LB_Maize
+0.0
-0.1
-0.2
-1.2
N.D.
lb control
LB control
+0.0
-0.1
-0.3
-1.1
N.D.
lb control
LB control
-0.0
-0.1
-0.1
-1.2
N.D.
phage
AgroPhage_C04
-0.1
-0.5
-0.3
-0.5
N.D.
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.0
-0.1
-0.2
-1.2
N.D.
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.0
+0.0
-0.2
-1.1
N.D.
lb_wheat
LB_wheat
+0.1
+0.1
-0.2
-1.2
N.D.
lb control
LB control
+0.0
+0.2
-0.2
-1.2
N.D.
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.0
+0.2
-0.2
-1.2
N.D.
lb_wheat
LB_wheat
+0.2
-0.1
+0.0
-1.3
N.D.
lb_wheat
LB_wheat
+0.2
+0.1
-0.1
-1.3
N.D.
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.2
+0.1
+0.1
-1.0
N.D.
lb_wheat
LB_wheat
+0.1
-0.0
+0.2
-1.2
N.D.
lb
LB
+0.3
+0.1
-0.2
-1.1
N.D.
lb_maize
LB_Maize
+0.2
+0.1
-0.1
-1.1
N.D.
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.0
+0.1
+0.2
-1.1
N.D.
nitrogen source
DL-2-Aminobutyric (N)
-0.2
+0.6
+0.7
-0.0
N.D.
phage
phage 100.2
+0.3
+0.4
+0.5
+0.2
N.D.
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