Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2183 and Atu2184 are separated by 30 nucleotidesAtu2184 and Atu2185 are separated by 131 nucleotidesAtu2185 and Atu2186 are separated by 18 nucleotidesAtu2186 and Atu2187 are separated by 600 nucleotides Atu2183: Atu2183 - lipopolysaccharide core biosynthesis mannosyltransferase, at 2,159,353 to 2,160,408 Atu2183 Atu2184: Atu2184 - transcriptional regulator, AsnC family, at 2,160,439 to 2,161,029 Atu2184 Atu2185: Atu2185 - thioredoxin reductase, at 2,161,161 to 2,162,135 Atu2185 Atu2186: Atu2186 - transcriptional regulator, LysR family, at 2,162,154 to 2,163,056 Atu2186 Atu2187: Atu2187 - transcriptional regulator, ArsR family, at 2,163,657 to 2,163,947 Atu2187
Group Condition Atu2183 Atu2184 Atu2185 Atu2186 Atu2187
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -6.5 -0.4 N.D. N.D. -0.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -6.5 -0.2 N.D. N.D. -0.3
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -6.1 -0.7 N.D. N.D. -0.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -6.5 +0.2 N.D. N.D. -0.6
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -6.1 -0.5 N.D. N.D. -0.3
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -6.5 -0.5 N.D. N.D. +0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -6.8 +0.0 N.D. N.D. -0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -5.5 -0.9 N.D. N.D. -0.3
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -5.6 -0.9 N.D. N.D. -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -5.6 -0.4 N.D. N.D. -0.6
stress R2A with Polymyxin B sulfate 0.00075 mM -6.7 +0.4 N.D. N.D. -0.0
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -6.1 -0.1 N.D. N.D. -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -5.5 -0.4 N.D. N.D. -0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -5.8 -0.4 N.D. N.D. +0.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -6.4 -0.1 N.D. N.D. +0.4
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -6.6 -0.3 N.D. N.D. +0.9
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -5.7 -0.5 N.D. N.D. +0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -5.3 -0.8 N.D. N.D. +0.4
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -5.0 -0.9 N.D. N.D. +0.3
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -6.0 -0.1 N.D. N.D. +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -5.0 -0.8 N.D. N.D. +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -4.7 -1.0 N.D. N.D. +0.7
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -5.9 -0.8 N.D. N.D. +2.0
phage AgroPhage_C04 +7.4 -1.0 N.D. N.D. -0.5
phage Phage 95.3 + bacteria +6.1 +0.1 N.D. N.D. -0.0
phage Phage 95.3 + bacteria +7.2 +0.6 N.D. N.D. -0.3
phage Phage 95.3 + bacteria +6.9 +0.5 N.D. N.D. +0.2
phage phage 95.1 +7.8 +0.2 N.D. N.D. -0.2
phage AgroPhage_C10 +7.8 -0.3 N.D. N.D. +0.7
nitrogen source DL-2-Aminobutyric (N) +1.2 +7.9 N.D. N.D. +0.8
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