Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2174 and Atu2175 are separated by 41 nucleotidesAtu2175 and Atu2176 are separated by 98 nucleotidesAtu2176 and Atu2177 are separated by 278 nucleotidesAtu2177 and Atu2178 are separated by 155 nucleotides Atu2174: Atu2174 - hypothetical protein, at 2,147,577 to 2,148,056 Atu2174 Atu2175: Atu2175 - hypothetical protein, at 2,148,098 to 2,149,015 Atu2175 Atu2176: Atu2176 - hypothetical protein, at 2,149,114 to 2,149,602 Atu2176 Atu2177: Atu2177 - hypothetical protein, at 2,149,881 to 2,150,516 Atu2177 Atu2178: Atu2178 - carbamoylphosphate synthase large subunit, at 2,150,672 to 2,154,160 Atu2178
Group Condition Atu2174 Atu2175 Atu2176 Atu2177 Atu2178
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -0.3 -1.2 -0.2 N.D.
carbon source L-ascorbate (C) -2.5 +0.0 +0.2 +0.1 N.D.
carbon source L-ascorbate (C) -2.7 +0.2 +0.2 +0.2 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.8 -0.0 -0.5 N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.8 +0.1 -0.3 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.0 -0.5 +0.1 +0.1 N.D.
phage AgroPhage_D10 -1.2 +0.1 -0.0 -0.1 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.3 -0.5 -0.4 N.D.
carbon source L-Galactose (C) -0.9 -0.1 +0.3 -0.0 N.D.
phage AgroPhage_C04 +0.4 +0.2 -0.9 -0.2 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -0.3 +0.5 -0.4 N.D.
carbon source methyl-alpha-D-xylopyranoside (C) -0.5 +0.6 -0.3 -0.0 N.D.
phage AgroPhage_B07 -0.3 -0.4 +0.1 +0.7 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.1 -0.4 +0.7 -0.1 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.6 +0.8 -0.1 N.D.
phage AgroPhage_D04 -0.7 +0.3 +0.4 +0.2 N.D.
Atjh10 +0.3 -0.4 -0.0 +0.7 N.D.
nitrogen source DL-2-Aminobutyric (N) +1.3 -0.5 -0.4 +0.3 N.D.
Atjh2 +0.7 -0.3 -0.2 +0.6 N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.1 +0.5 +0.4 N.D.
Atjh10 +0.7 -0.1 -0.2 +0.6 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 -0.3 -0.2 +0.9 N.D.
Atjh15 +0.5 -0.0 +0.3 +0.5 N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 +0.2 +0.3 +0.3 N.D.
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.4 +0.7 +0.1 N.D.
no phage P2L5 +0.2 +0.8 +0.3 +0.2 N.D.
Atjh15 +0.8 +0.1 +0.1 +0.7 N.D.
No phage control +0.5 +0.1 +0.2 +0.8 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.1 +0.3 +0.7 +0.6 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.1 +1.1 +0.5 N.D.
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