Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2168 and Atu2169 are separated by 386 nucleotidesAtu2169 and Atu2170 are separated by 335 nucleotidesAtu2170 and Atu2171 are separated by 532 nucleotidesAtu2171 and Atu2172 are separated by 70 nucleotides Atu2168: Atu2168 - DNA primase, at 2,136,980 to 2,138,965 Atu2168 Atu2169: Atu2169 - hypothetical protein, at 2,139,352 to 2,139,804 Atu2169 Atu2170: Atu2170 - carbamoylphosphate synthase small chain, at 2,140,140 to 2,141,345 Atu2170 Atu2171: Atu2171 - hydrolase, at 2,141,878 to 2,143,392 Atu2171 Atu2172: Atu2172 - multidrug efflux protein, at 2,143,463 to 2,144,860 Atu2172
Group Condition Atu2168 Atu2169 Atu2170 Atu2171 Atu2172
stress Streptomycin 200 ug/mL N.D. -2.9 N.D. -0.0 -0.5
stress Streptomycin 200 ug/mL N.D. -2.3 N.D. +0.1 -0.6
stress Chloramphenicol 12.5 ug/mL N.D. -1.3 N.D. -0.1 -0.2
stress Streptomycin 100 ug/mL N.D. -1.2 N.D. -0.0 -0.3
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.7 N.D. -0.1 -0.3
Atjh15 N.D. -0.7 N.D. -0.3 -0.1
stress Chloramphenicol 12.5 ug/mL N.D. -1.0 N.D. -0.4 +0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -1.0 N.D. -0.0 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days N.D. -0.9 N.D. -0.1 +0.1
stress R2A with Chloride 700 mM N.D. -0.5 N.D. +0.2 -0.3
stress R2A with Chloride 700 mM N.D. -0.7 N.D. +0.2 -0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.9 N.D. +0.1 +0.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.4 N.D. +0.2 -0.5
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.7 N.D. +0.3 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -0.5 N.D. -0.3 +0.4
Atjh14 N.D. +0.8 N.D. -0.4 -0.8
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.3 N.D. +0.3 -0.4
no phage P5L5 N.D. -0.7 N.D. +0.1 +0.4
phage AgroPhage_E10 N.D. -0.6 N.D. -0.1 +0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.7 N.D. +0.2 +0.5
Atjh2 N.D. +0.7 N.D. -0.3 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -0.4 N.D. +0.5 +0.2
stress R2A with Vancomycin 0.009 mM N.D. +0.7 N.D. -0.1 -0.2
carbon source L-ascorbate (C) N.D. +0.8 N.D. +0.1 -0.2
phage AgroPhage_F10 N.D. +0.9 N.D. -0.1 +0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.7 N.D. -0.1 +0.3
stress R2A with m-arsenite 0.8 mM N.D. +0.7 N.D. -0.1 +0.4
stress Erythromycin 12.5 ug/mL N.D. +1.3 N.D. -0.0 -0.1
stress Erythromycin 12.5 ug/mL N.D. +1.4 N.D. +0.0 -0.2
phage phage 95.1 N.D. +0.9 N.D. +0.2 +0.2
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