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Cofit
Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Number of genes on each side:
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2
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu2152 and Atu2153 are separated by 332 nucleotides
Atu2153 and Atu2154 are separated by 78 nucleotides
Atu2154 and Atu2155 are separated by 73 nucleotides
Atu2155 and Atu2156 are separated by 191 nucleotides
Atu2152: Atu2152 - hypothetical protein, at 2,116,872 to 2,117,513
Atu2152
Atu2153: Atu2153 - ABC transporter, nucleotide binding/ATPase protein, at 2,117,846 to 2,118,622
Atu2153
Atu2154: Atu2154 - MFS permease, at 2,118,701 to 2,120,032
Atu2154
Atu2155: Atu2155 - methionine synthase, at 2,120,106 to 2,123,879
Atu2155
Atu2156: Atu2156 - hypothetical protein, at 2,124,071 to 2,125,318
Atu2156
Group
Condition
Atu2152
Atu2153
Atu2154
Atu2155
Atu2156
carbon source
D-Mannose (C)
-0.1
-0.0
-0.1
-2.5
-6.8
carbon source
D-Mannose (C)
+0.1
+0.2
-0.0
-2.5
-6.7
carbon source
Mannobiose (C)
-0.2
+0.2
-0.1
-3.9
-2.7
carbon source
Lactulose (C)
-0.1
+0.1
-0.1
-6.3
+0.0
carbon source
Lactulose (C)
+0.1
-0.1
+0.1
-6.1
-0.1
carbon source
Mannobiose (C)
+0.2
+0.4
-0.1
-3.7
-2.8
carbon source
D-(-)-lyxose (C)
+0.1
-0.1
-0.0
-1.9
-3.9
carbon source
Beta-Lactose (C)
-0.1
+0.2
-0.1
-5.9
-0.0
carbon source
D-Leucrose (C)
+0.2
-0.1
-0.0
-5.9
+0.1
carbon source
D-Trehalose (C)
+0.2
-0.1
-0.0
-5.7
+0.0
carbon source
D-(-)-lyxose (C)
+0.2
-0.1
-0.1
-2.0
-3.6
carbon source
Sucrose (C)
+0.1
-0.1
+0.0
-5.6
-0.0
carbon source
palatinose (C)
+0.0
-0.0
-0.1
-5.4
+0.0
carbon source
Maltitol (C)
-0.1
+0.1
-0.1
-5.3
-0.0
carbon source
D-Glucose (C)
+0.1
-0.2
-0.0
-5.4
+0.2
carbon source
NAG (C)
-0.2
-0.2
-0.2
-4.7
-0.1
carbon source
palatinose (C)
-0.1
+0.2
-0.2
-5.2
-0.0
carbon source
Lactitol (C)
+0.2
+0.0
+0.1
-5.6
-0.0
carbon source
Beta-Lactose (C)
+0.2
+0.2
+0.1
-5.7
-0.0
carbon source
D-Glucose (C)
-0.1
+0.1
+0.0
-5.4
+0.2
carbon source
Lactitol (C)
-0.1
+0.2
+0.1
-5.4
+0.0
carbon source
Sucrose (C)
-0.2
+0.2
+0.1
-5.2
+0.0
carbon source
D-Trehalose (C)
+0.1
-0.1
+0.0
-5.1
-0.0
carbon source
Maltitol (C)
+0.2
+0.1
+0.0
-5.3
-0.1
carbon source
D-Leucrose (C)
-0.0
+0.2
-0.2
-4.9
-0.0
carbon source
L-Sorbose (C)
-0.2
-0.2
-0.0
-4.1
-0.1
carbon source
NAG (C)
+0.2
-0.0
+0.0
-4.7
-0.0
carbon source
D-Galacturonic Acid (C)
+0.1
-0.1
-0.0
-4.3
+0.1
carbon source
L-Sorbose (C)
+0.1
-0.2
+0.1
-3.9
+0.2
carbon source
L-ascorbate (C)
+0.1
+0.4
+0.1
-4.2
-0.0
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