Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2137 and Atu2138 are separated by 12 nucleotidesAtu2138 and Atu2139 overlap by 4 nucleotidesAtu2139 and Atu2140 are separated by 17 nucleotidesAtu2140 and Atu2141 are separated by 142 nucleotides Atu2137: Atu2137 - hypothetical protein, at 2,102,537 to 2,102,917 Atu2137 Atu2138: Atu2138 - dehydrogenase, at 2,102,930 to 2,104,075 Atu2138 Atu2139: Atu2139 - aldehyde dehydrogenase, at 2,104,072 to 2,105,460 Atu2139 Atu2140: Atu2140 - hypothetical protein, at 2,105,478 to 2,105,744 Atu2140 Atu2141: Atu2141 - hypothetical protein, at 2,105,887 to 2,106,309 Atu2141
Group Condition Atu2137 Atu2138 Atu2139 Atu2140 Atu2141
nitrogen source Ethanolamine (N) -0.3 -2.8 -2.8 -3.4 -2.5
nitrogen source Ethanolamine (N) -0.6 -2.4 -2.6 -3.0 -2.6
nitrogen source spermidine (N) -0.2 -0.6 -0.7 -1.2 -0.6
nitrogen source spermidine (N) -0.1 -0.7 -0.8 -0.8 -0.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.1 -0.4 -2.5 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 -0.2 -0.3 -2.0 +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.0 -1.4 -0.7 -0.2
phage AgroPhage_D10 +0.0 -0.1 -0.6 -0.6 -1.0
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.5 -0.2 -0.4 -0.6
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.3 -0.4 -1.0 -0.5
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 +0.3 -0.2 -0.3 -1.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.1 -0.9 +0.2 -0.9
phage AgroPhage_H03 +0.4 -0.1 +0.1 -1.6 -0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.4 -0.3 +0.5 -0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.2 -0.9 -1.1 +0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.3 +0.3 -1.0 -0.6
phage AgroPhage_E04 -0.1 +0.2 +0.6 -1.3 +0.2
stress Chloramphenicol 12.5 ug/mL +0.0 +0.3 -0.4 -0.9 +0.8
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.4 +0.1 -0.2 -1.0 +0.4
phage AgroPhage_C04 +0.5 -0.4 -0.1 +0.5 -0.7
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.5 -0.6 +0.8 +0.3
phage AgroPhage_B07 +0.4 +0.1 +0.3 -1.1 +0.3
nophagecontrol No phage control +0.3 -0.4 +0.9 -0.8 -0.0
phage AgroPhage_A01 +0.1 +0.2 +0.4 -1.1 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +0.1 +0.3 +0.5 -1.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.4 -0.3 -0.2 +0.9
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.6 +0.2 -0.1 -0.9 +0.5
phage AgroPhage_A07 +0.8 -0.2 +0.4 -0.9 +0.5
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.4 +0.3 -0.4 +0.6 +0.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.4 -0.5 +0.2 +0.9
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