Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2129 and Atu2130 are separated by 207 nucleotidesAtu2130 and Atu2131 are separated by 47 nucleotidesAtu2131 and Atu2132 are separated by 97 nucleotidesAtu2132 and Atu2133 are separated by 153 nucleotides Atu2129: Atu2129 - hypothetical protein, at 2,095,377 to 2,096,141 Atu2129 Atu2130: Atu2130 - hypothetical protein, at 2,096,349 to 2,096,690 Atu2130 Atu2131: Atu2131 - hypothetical protein, at 2,096,738 to 2,097,076 Atu2131 Atu2132: Atu2132 - hypothetical protein, at 2,097,174 to 2,098,007 Atu2132 Atu2133: Atu2133 - hypothetical protein, at 2,098,161 to 2,099,543 Atu2133
Group Condition Atu2129 Atu2130 Atu2131 Atu2132 Atu2133
stress R2A with Polymyxin B sulfate 0.00075 mM +0.0 +0.0 +0.1 +0.3 -2.9
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -1.2 +0.0 -0.2 -0.3
nitrogen source Glycine (N) -0.2 -0.1 -1.2 -0.2 -0.3
carbon source D-glutamine (C) +0.0 -1.0 -0.6 -0.1 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +0.0 -1.1 -0.5 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.9 -0.1 -0.5 -0.4
nitrogen source L-Threonine (N) -0.1 -0.2 -1.3 -0.1 -0.0
carbon source L-Sorbose (C) +0.0 -0.3 -1.5 +0.0 +0.0
phage AgroPhage_B07 +0.3 -1.2 -0.2 -0.4 -0.2
carbon source L-ascorbate (C) +0.2 -0.0 -0.6 -0.0 -1.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -1.1 -0.7 +0.1 -0.0
phage AgroPhage_F10 +0.0 -1.2 -0.5 +0.0 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.9 -0.5 +0.0 -0.2
phage AgroPhage_H04 +0.1 -0.6 -0.4 -0.5 +0.1
nitrogen source L-Threonine (N) -0.1 +0.3 -1.2 +0.0 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.9 -0.7 +0.1 -0.0
carbon source D-Galacturonic Acid (C) +0.0 +0.2 -1.2 +0.1 -0.2
phage AgroPhage_C10 -0.7 -0.2 +0.7 -0.5 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.3 -0.6 +0.1 -0.6
phage AgroPhage_E04 +0.0 -1.4 +0.1 +0.3 +0.0
stress R2A with Ceftazidime 4 mM +0.2 -0.0 -0.1 +0.3 -1.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.3 -0.7 +0.3 -0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.5 -0.5 -0.4 +0.1
phage AgroPhage_D10 +0.9 +0.4 -0.5 +0.1 +0.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.8 +0.0 +0.3 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +0.8 -0.2 +0.2 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3 +1.0 -0.1 -0.3 +0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +1.0 +0.7 -0.2 -0.1
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +1.2 +0.3 -0.1 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +0.5 -0.1 +0.9 +0.4
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