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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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500 nt
Atu2114 and Atu2115 are separated by 334 nucleotides
Atu2115 and Atu2116 are separated by 52 nucleotides
Atu2116 and Atu2117 are separated by 136 nucleotides
Atu2117 and Atu2119 are separated by 341 nucleotides
Atu2114: Atu2114 - molecular chaperone, DnaJ family, at 2,078,086 to 2,078,823
Atu2114
Atu2115: Atu2115 - pyrophosphate--fructose-6-phosphate 1-phosphotransferase, at 2,079,158 to 2,080,369
Atu2115
Atu2116: Atu2116 - hypothetical protein, at 2,080,422 to 2,081,057
Atu2116
Atu2117: Atu2117 - lytic murein transglycosylase, at 2,081,194 to 2,082,270
Atu2117
Atu2119: Atu2119 - hypothetical protein, at 2,082,612 to 2,083,862
Atu2119
Group
Condition
Atu2114
Atu2115
Atu2116
Atu2117
Atu2119
carbon source
L-Fucose (C)
-0.2
-5.3
+0.4
-0.2
-0.1
carbon source
succinate (C)
-0.2
-4.9
+0.1
-0.2
-0.1
carbon source
D-Quinic (C)
+0.1
-5.5
+0.2
-0.2
+0.0
carbon source
Protocatechuic Acid (C)
-0.2
-4.8
-0.3
+0.0
-0.1
carbon source
Protocatechuic Acid (C)
-0.2
-5.0
-0.0
-0.0
+0.0
carbon source
m-Inositol (C)
-0.1
-5.0
-0.2
+0.2
+0.1
carbon source
Fumarate (C)
-0.5
-4.4
+0.0
-0.1
-0.1
carbon source
L-Fucose (C)
+0.1
-5.0
+0.0
-0.1
-0.1
carbon source
trans-aconitic (C)
+0.2
-4.5
-0.2
-0.1
-0.2
carbon source
D-Quinic (C)
-0.2
-4.7
+0.1
+0.1
-0.1
carbon source
pyruvate (C)
-0.0
-4.3
-0.1
-0.2
-0.0
carbon source
L-Galactose (C)
-0.1
-4.0
-0.5
-0.0
+0.1
carbon source
D-Glucuronic gamma lactone (C)
-0.2
-4.7
+0.2
+0.2
-0.0
carbon source
4-Hydroxybenzoic Acid (C)
-0.0
-3.9
-0.7
+0.2
-0.0
nitrogen source
L-Histidine (N)
+0.2
-4.6
-0.0
-0.1
-0.0
carbon source
D-glutamine (C)
+0.1
-4.3
+0.0
-0.2
-0.1
nitrogen source
L-Asparagine (N)
+0.3
-4.3
-0.1
-0.2
-0.0
carbon source
L-Arabinose (C)
-0.0
-4.3
-0.1
+0.2
-0.1
carbon source
L-Galactose (C)
-0.0
-4.4
-0.2
+0.3
+0.1
carbon source
Fumarate (C)
-0.1
-4.3
-0.1
+0.1
+0.1
carbon source
D-Galactose (C)
+0.2
-4.7
+0.2
+0.1
+0.0
carbon source
succinate (C)
-0.1
-4.3
-0.1
+0.2
+0.1
nitrogen source
L-Proline (N)
+0.3
-4.1
-0.1
-0.0
-0.2
carbon source
trans-aconitic (C)
+0.3
-4.2
+0.1
-0.3
+0.1
nitrogen source
Beta-alanine (N)
+0.5
-3.8
-0.2
-0.3
-0.2
carbon source
D-Galactose (C)
-0.1
-4.2
+0.3
+0.0
+0.1
nitrogen source
L-Asparagine (N)
+0.4
-3.9
-0.1
-0.1
-0.1
carbon source
D,L-Malic Acid (C)
+0.4
-3.7
-0.4
-0.2
+0.1
carbon source
pyruvate (C)
+0.4
-3.7
-0.3
-0.2
+0.2
stress
R2A with Vancomycin 0.009 mM
-0.7
-1.1
+0.8
+2.0
+0.2
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