Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2102 and Atu2103 are separated by 14 nucleotidesAtu2103 and Atu2104 are separated by 705 nucleotidesAtu2104 and Atu2105 are separated by 9 nucleotidesAtu2105 and Atu2107 are separated by 541 nucleotides Atu2102: Atu2102 - S-adenosyl methionine-dependent methytransferase, at 2,067,546 to 2,068,571 Atu2102 Atu2103: Atu2103 - hypothetical protein, at 2,068,586 to 2,069,026 Atu2103 Atu2104: Atu2104 - hypothetical protein, at 2,069,732 to 2,070,133 Atu2104 Atu2105: Atu2105 - hypothetical protein, at 2,070,143 to 2,070,739 Atu2105 Atu2107: Atu2107 - IS3 family transposase, at 2,071,281 to 2,072,819 Atu2107
Group Condition Atu2102 Atu2103 Atu2104 Atu2105 Atu2107
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.5 -0.7 N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. -0.8 -0.1 N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.7 -0.2 N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -1.0 +0.2 N.D.
phage AgroPhage_B01 N.D. N.D. -0.5 -0.3 N.D.
stress R2A with Calcium Chloride Dihydrate 87.5 mM N.D. N.D. -0.7 -0.0 N.D.
stress R2A with Oxytetracycline 0.0002 mM N.D. N.D. -0.3 -0.4 N.D.
stress Chloramphenicol 12.5 ug/mL N.D. N.D. -0.5 -0.1 N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -0.5 -0.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -0.5 -0.2 N.D.
stress R2A with cyanide 2.5 mM N.D. N.D. -0.2 -0.5 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.4 -0.3 N.D.
Atjh14 N.D. N.D. +0.2 -0.7 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.5 +0.2 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. +0.3 -0.4 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.4 -0.3 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.4 -0.3 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. +0.4 -0.2 N.D.
stress R2A with Chloride 700 mM N.D. N.D. +0.6 -0.2 N.D.
stress R2A with m-arsenite 0.8 mM N.D. N.D. +0.5 -0.1 N.D.
phage AgroPhage_E04 N.D. N.D. +0.5 -0.1 N.D.
stress R2A with Manganese (II) chloride tetrahydrate 5 mM N.D. N.D. +0.6 -0.1 N.D.
nitrogen source DL-2-Aminobutyric (N) N.D. N.D. +0.7 -0.1 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. +0.7 -0.1 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. +0.6 +0.1 N.D.
phage phage 99.1 N.D. N.D. +0.6 +0.1 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.7 -0.0 N.D.
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days N.D. N.D. +0.6 +0.1 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. +0.3 +0.5 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. +0.6 +0.2 N.D.
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