Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2038 and Atu2039 are separated by 7 nucleotidesAtu2039 and Atu2040 overlap by 2 nucleotidesAtu2040 and Atu2041 overlap by 4 nucleotidesAtu2041 and Atu2042 are separated by 25 nucleotides Atu2038: Atu2038 - hypothetical protein, at 1,996,183 to 1,998,189 Atu2038 Atu2039: Atu2039 - tRNA delta(2)-isopentenylpyrophosphate, at 1,998,197 to 1,999,093 Atu2039 Atu2040: Atu2040 - phosphoserine phosphatase, at 1,999,092 to 1,999,982 Atu2040 Atu2041: Atu2041 - acetyltransferase, at 1,999,979 to 2,000,542 Atu2041 Atu2042: Atu2042 - short chain dehydrogenase, at 2,000,568 to 2,001,317 Atu2042
Group Condition Atu2038 Atu2039 Atu2040 Atu2041 Atu2042
carbon source D-Mannose (C) -0.0 N.D. -7.2 -0.2 -0.1
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 N.D. -6.0 -0.6 -0.8
carbon source D-Glucose (C) -0.0 N.D. -7.4 -0.0 -0.0
carbon source D-Mannitol (C) -0.1 N.D. -7.4 -0.2 +0.3
carbon source D-Mannitol (C) +0.1 N.D. -7.4 -0.1 +0.2
carbon source D-Ribose (C) +0.0 N.D. -7.0 -0.3 +0.1
carbon source Fumarate (C) -0.0 N.D. -6.8 -0.1 -0.2
carbon source L-Sorbose (C) -0.1 N.D. -6.6 +0.1 -0.3
carbon source D-Fructose (C) -0.1 N.D. -6.6 +0.2 -0.4
carbon source Beta-Lactose (C) -0.0 N.D. -7.2 +0.3 +0.1
carbon source Lactulose (C) +0.1 N.D. -7.1 +0.5 +0.0
carbon source Methyl beta-D-glucopyranoside (C) -0.1 N.D. -6.8 +0.4 +0.0
carbon source Lactitol (C) -0.0 N.D. -6.9 +0.4 +0.1
nitrogen source L-Pipecolic Acid (N) -0.1 N.D. -6.6 +0.2 +0.2
carbon source Cellopentaose (C) -0.1 N.D. -6.5 +0.4 -0.1
carbon source methyl-beta-D-xylopyranoside (C) +0.0 N.D. -6.9 +0.2 +0.3
carbon source D-Glucose (C) -0.1 N.D. -6.9 +0.5 +0.1
carbon source Beta-Lactose (C) -0.1 N.D. -6.7 +0.5 +0.0
nitrogen source L-Glutamine (N) +0.1 N.D. -6.7 +0.5 -0.1
carbon source D-Quinic (C) +0.0 N.D. -6.5 +0.5 -0.1
carbon source D-Maltose (C) -0.1 N.D. -6.6 +0.4 +0.2
nitrogen source L-Glutamic (N) +0.0 N.D. -6.5 +0.6 -0.2
carbon source NAG (C) -0.0 N.D. -6.6 +0.4 +0.3
carbon source m-Inositol (C) -0.2 N.D. -6.3 +0.9 -0.2
carbon source D-Fructose (C) -0.0 N.D. -6.5 +0.5 +0.2
carbon source D-Glucose (C) -0.1 N.D. -6.3 +0.5 +0.2
carbon source D-Maltose (C) -0.1 N.D. -6.4 +0.8 +0.1
carbon source D-Glucose-6-Phosphate (C) -0.1 N.D. -6.4 +0.7 +0.0
carbon source methyl 3-keto-a-D-glucopyranoside (C) -0.1 N.D. -6.3 +0.6 +0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 N.D. -4.9 +1.8 -0.5
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