Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2031 and Atu2032 are separated by 179 nucleotidesAtu2032 and Atu2033 are separated by 139 nucleotidesAtu2033 and Atu2034 overlap by 8 nucleotidesAtu2034 and Atu2035 are separated by 125 nucleotides Atu2031: Atu2031 - hypothetical protein, at 1,990,442 to 1,991,230 Atu2031 Atu2032: Atu2032 - aldo/keto reductase, at 1,991,410 to 1,992,255 Atu2032 Atu2033: Atu2033 - hypothetical protein, at 1,992,395 to 1,992,928 Atu2033 Atu2034: Atu2034 - transcriptional regulator, ArsR family, at 1,992,921 to 1,993,289 Atu2034 Atu2035: Atu2035 - acetolactate synthase, small subunit, at 1,993,415 to 1,993,987 Atu2035
Group Condition Atu2031 Atu2032 Atu2033 Atu2034 Atu2035
carbon source D-Galacturonic Acid (C) -0.2 -0.0 -0.3 +0.3 -3.2
carbon source D-Galacturonic Acid (C) -0.2 -0.1 -0.0 +0.6 -2.9
phage AgroPhage_A07 -0.2 -0.0 -1.4 -0.8 -0.2
phage phage 95.1 -0.4 -0.1 -1.0 -0.0 -0.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.1 +0.3 -0.6 -1.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -0.1 +0.2 -0.4 -1.2
carbon source 1,4-Butanediol (C) -0.4 -0.4 +0.3 -0.1 -0.5
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.1 -0.4 +0.3 -0.7
carbon source L-ascorbate (C) -1.0 -0.0 -0.6 +0.2 +0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.3 -0.2 -0.9 -0.1
phage AgroPhage_D10 -0.4 +0.1 -0.7 -0.1 +0.3
phage AgroPhage_E10 +0.1 +0.0 -1.6 +0.7 -0.2
carbon source Lactulose (C) -0.3 +0.1 +0.3 +0.2 -0.9
carbon source Mannobiose (C) -0.3 +0.2 +0.4 -0.2 -0.6
nophagecontrol No phage control +0.5 -0.3 -0.7 -0.0 +0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -0.4 +0.2 -0.2 -0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.2 -0.2 -0.8 +0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.2 +0.5 -0.8 -0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.2 +0.4 -0.4 -0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.2 +1.1 -0.3 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.1 +0.1 -0.5 +0.1 +0.9
nitrogen source DL-2-Aminobutyric (N) +0.1 +0.4 +0.5 -0.5 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 -0.5 +0.6 -0.0 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 -0.2 +0.1 +0.7 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 -0.4 -0.1 +1.3 +0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.2 +0.4 -0.7 +0.3 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.0 +1.0 -0.5 +0.6
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 +0.3 +0.8 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +0.4 +0.6 +0.3 +0.2
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.3 +0.4 +0.8 +0.3
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