Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu8024 and Atu1991 are separated by 31 nucleotidesAtu1991 and Atu1992 are separated by 25 nucleotidesAtu1992 and Atu1993 are separated by 209 nucleotidesAtu1993 and Atu1994 are separated by 76 nucleotides Atu8024: Atu8024 - hypothetical protein, at 1,956,634 to 1,956,741 Atu8024 Atu1991: Atu1991 - tRNA-Gly, at 1,956,773 to 1,956,846 Atu1991 Atu1992: Atu1992 - tRNA-Tyr, at 1,956,872 to 1,956,956 Atu1992 Atu1993: Atu1993 - tRNA/rRNA metyltransferase, at 1,957,166 to 1,958,053 Atu1993 Atu1994: Atu1994 - acyl-CoA hydrolase, at 1,958,130 to 1,958,522 Atu1994
Group Condition Atu8024 Atu1991 Atu1992 Atu1993 Atu1994
carbon source m-Inositol (C) -0.0 N.D. N.D. +0.1 -2.1
carbon source m-Inositol (C) -0.1 N.D. N.D. +0.2 -2.2
phage AgroPhage_D10 -1.3 N.D. N.D. -0.1 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 N.D. N.D. -0.8 -0.5
phage AgroPhage_E10 -0.1 N.D. N.D. -0.7 -0.7
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.0 N.D. N.D. -0.5 +0.2
nitrogen source L-Pipecolic Acid (N) -0.1 N.D. N.D. +0.2 -1.2
stress R2A with Vancomycin 0.009 mM -0.6 N.D. N.D. -0.6 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 N.D. N.D. -0.9 -0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 N.D. N.D. -1.2 +0.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 N.D. N.D. -0.8 +0.3
stress R2A with m-arsenite 0.8 mM -0.2 N.D. N.D. -0.8 +0.3
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 N.D. N.D. -0.4 -0.5
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.9 N.D. N.D. -1.0 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.5 N.D. N.D. -0.2 -0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 N.D. N.D. -0.5 +0.7
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 N.D. N.D. -0.6 +0.4
nophagecontrol No phage control -0.2 N.D. N.D. -0.3 +0.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.9 N.D. N.D. -0.6 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 N.D. N.D. -0.6 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.2 N.D. N.D. -0.6 -0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 N.D. N.D. -0.5 +0.8
no phage P5L5 +0.4 N.D. N.D. -0.4 +0.5
stress Erythromycin 12.5 ug/mL -0.2 N.D. N.D. +1.0 -0.2
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 N.D. N.D. -0.3 +0.8
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 N.D. N.D. -0.3 +0.5
stress Chloramphenicol 12.5 ug/mL -0.1 N.D. N.D. +1.5 -0.4
nitrogen source DL-2-Aminobutyric (N) +0.3 N.D. N.D. +0.8 +0.2
stress Chloramphenicol 12.5 ug/mL +0.4 N.D. N.D. +1.0 -0.1
stress Erythromycin 12.5 ug/mL +0.2 N.D. N.D. +1.4 +0.6
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