Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1905 and Atu1906 are separated by 169 nucleotidesAtu1906 and Atu1907 overlap by 4 nucleotidesAtu1907 and Atu1908 are separated by 104 nucleotidesAtu1908 and Atu1909 are separated by 85 nucleotides Atu1905: Atu1905 - short chain dehydrogenase, at 1,882,667 to 1,883,452 Atu1905 Atu1906: Atu1906 - ABC transporter, membrane spanning protein, at 1,883,622 to 1,884,383 Atu1906 Atu1907: Atu1907 - ABC transporter, nucleotide binding/ATPase protein, at 1,884,380 to 1,885,306 Atu1907 Atu1908: Atu1908 - hypothetical protein, at 1,885,411 to 1,886,232 Atu1908 Atu1909: Atu1909 - hypothetical protein, at 1,886,318 to 1,886,512 Atu1909
Group Condition Atu1905 Atu1906 Atu1907 Atu1908 Atu1909
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -1.3 -1.4 -0.3 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -1.2 -1.5 +0.1 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.7 -1.1 +0.0 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -0.8 -0.7 -0.3 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.9 -0.7 -0.2 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 -1.1 -0.7 -0.0 N.D.
stress R2A with Nitrofurantoin 0.4 mg/mL +0.2 -1.0 -0.9 +0.0 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.7 -0.6 -0.1 N.D.
stress R2A with Nitrofurantoin 0.4 mg/mL -0.4 -0.9 -0.5 +0.2 N.D.
Atjh14 -0.6 -0.3 -0.5 -0.1 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.6 -0.8 +0.2 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 -1.3 -0.8 +0.1 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.7 -0.6 +0.3 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -1.1 -0.1 +0.4 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 -1.1 -0.3 +0.1 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 -0.6 -0.3 +0.1 N.D.
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.8 -0.1 +0.4 N.D.
nophagecontrol No phage control +0.5 -0.6 +0.2 -0.2 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.0 -0.3 -0.5 +0.0 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -0.5 -0.2 +0.4 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 +0.3 -0.2 -0.5 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 -0.2 -0.3 +0.2 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 -0.0 -0.5 +0.2 N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.3 +1.1 -0.4 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.9 -0.2 +0.3 +0.2 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.9 -0.2 +0.2 +0.3 N.D.
stress Chloramphenicol 12.5 ug/mL +0.1 +0.5 +0.7 +0.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +0.4 -0.0 +0.6 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +0.4 +0.9 +0.3 N.D.
stress Chloramphenicol 12.5 ug/mL +0.2 +1.0 +1.0 +0.1 N.D.
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