Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu1891	Atu1892	Atu1893	Atu1895	Atu1896
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-2.8	-0.9	-0.2	-0.3	+0.1
carbon source	Propan-1-ol (C)	-3.9	+0.4	+0.1	-0.0	+0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-2.1	+0.1	-0.7	-0.7	+0.2
stress	R2A with Calcium Chloride Dihydrate 87.5 mM	-2.9	-0.5	+0.1	+0.1	+0.2
carbon source	Propan-1-ol (C)	-3.0	+0.1	+0.0	-0.3	-0.0
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.9	-1.4	-0.0	-0.4	-0.1
stress	R2A with sodium iodate 30 mM	-1.5	-0.4	-0.2	-0.2	-0.4
phage	Phage 95.3 + bacteria	-1.1	-0.8	-0.2	-0.1	-0.5
carbon source	acetate (C)	-1.8	-0.6	-0.1	-0.1	-0.1
phage	AgroPhage_E10	-2.6	+0.1	-0.1	-0.9	+0.8
carbon source	NAG (C)	-2.3	-0.2	+0.2	-0.0	-0.1
stress	R2A with Phosphomycin 50 mM	-1.6	-0.4	+0.2	-0.0	-0.5
stress	R2A with Chlorate 400 mM	-2.5	+0.1	-0.0	+0.1	-0.0
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-3.0	+0.4	-0.3	-0.3	+0.9
r2a_control	R2A control	-2.0	-0.1	+0.3	-0.1	-0.3
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	-1.8	-0.3	-0.2	-0.2	+0.5
stress	R2A with Phenazine methosulfate 0.05 mM	-2.2	+0.2	+0.0	+0.2	-0.2
carbon source	NAG (C)	-2.7	+0.2	+0.2	+0.2	+0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-2.0	+0.1	-0.3	-0.6	+1.0
carbon source	Methyl alpha-D-glucopyranoside (C)	-1.8	-0.5	+0.4	+0.1	+0.1
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-1.8	-0.8	+0.3	+0.4	+0.2
stress	R2A with Oxytetracycline 0.0002 mM	-1.7	-0.4	+0.2	+0.2	+0.2
phage	AgroPhage_F10	-2.0	+0.4	+0.2	-0.3	+0.4
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-1.1	+0.6	-0.2	+0.6	-1.2
in planta	Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	-0.8	-1.1	+0.3	+0.3	+0.4
carbon source	D-Galacturonic Acid (C)	-1.6	+0.1	+0.3	+0.4	+0.3
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-1.5	+0.7	-0.3	+0.1	+0.6
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.8	-0.3	+0.4	-0.2	+1.1
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.7	+1.1	+0.1	+0.1	+0.7
nitrogen source	DL-2-Aminobutyric (N)	+0.5	+0.2	+1.4	-0.4	+1.3