Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu1883	Atu1884	Atu1885	Atu1886	Atu1887
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.7	-0.3	N.D.	-0.1	-0.5
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	-0.5	N.D.	-0.5	-0.0
phage	AgroPhage_C10	+0.3	-1.2	N.D.	-0.2	-0.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.9	-0.4	N.D.	-0.4	+0.3
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.0	-1.0	N.D.	-0.1	-0.2
in planta	Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.2	-0.7	N.D.	-0.3	+0.1
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	-0.4	N.D.	-0.4	+0.1
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	-0.0	N.D.	+0.3	-0.4
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.8	N.D.	+0.3	+0.3
nophagecontrol	No phage control	-0.2	+0.4	N.D.	+0.2	-0.4
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.4	+0.4	N.D.	-0.4	-0.4
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.5	-0.3	N.D.	-0.2	+1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.4	+0.3	N.D.	+0.4	-0.2
stress	R2A with Aluminum chloride 0.3 mM	+0.3	-0.5	N.D.	+0.1	+0.2
stress	R2A with Vancomycin 0.009 mM	+0.8	-0.8	N.D.	-0.1	+0.3
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.1	+0.7	N.D.	+0.3	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.3	+0.1	N.D.	-0.1	+0.7
in planta	Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.2	+0.6	N.D.	-0.2	-0.2
stress	Cinnamic 1.25 mM	+0.3	+0.5	N.D.	-0.2	-0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.4	-0.3	N.D.	+0.1	+0.4
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.4	-0.4	N.D.	+0.4	+0.4
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.8	N.D.	-0.3	+0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.2	+0.7	N.D.	+0.4	-0.0
carbon source	D-Glucuronic gamma lactone (C)	+0.2	+0.8	N.D.	-0.1	+0.2
stress	R2A with vanadium chloride 0.08 mM	+0.2	+0.4	N.D.	+0.2	+0.4
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.2	+0.4	N.D.	+0.3	+0.4
in planta	Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.2	+0.7	N.D.	+0.3	-0.0
in planta	Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	+0.5	+0.4	N.D.	+0.3	+0.2
carbon source	D-Saccharic potassium salt (C)	+0.3	+0.5	N.D.	+0.4	+0.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.3	+0.5	N.D.	+0.2	+0.5