Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1872 and Atu1873 are separated by 112 nucleotidesAtu1873 and Atu1874 are separated by 230 nucleotidesAtu1874 and Atu1875 are separated by 294 nucleotidesAtu1875 and Atu1876 are separated by 28 nucleotides Atu1872: Atu1872 - hypothetical protein, at 1,850,536 to 1,850,919 Atu1872 Atu1873: Atu1873 - alanyl-tRNA synthetase, at 1,851,032 to 1,853,695 Atu1873 Atu1874: Atu1874 - RecA protein, at 1,853,926 to 1,855,017 Atu1874 Atu1875: Atu1875 - carbohydrate kinase, at 1,855,312 to 1,856,205 Atu1875 Atu1876: Atu1876 - hypothetical protein, at 1,856,234 to 1,857,157 Atu1876
Group Condition Atu1872 Atu1873 Atu1874 Atu1875 Atu1876
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 N.D. -4.7 -0.2 -0.9
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.3 N.D. -4.7 +0.1 -0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 N.D. -4.7 +0.2 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.1 N.D. -4.7 -0.2 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 N.D. -4.6 -0.2 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 N.D. -4.8 +0.3 -0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.3 N.D. -4.5 -0.0 -0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.1 N.D. -4.4 -0.0 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.2 N.D. -4.4 -0.2 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 N.D. -4.7 +0.2 +0.2
phage AgroPhage_D10 -0.3 N.D. -3.2 -0.3 -0.5
stress R2A with Cisplatin 0.0016 mM -0.1 N.D. -3.9 -0.1 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 N.D. -3.7 +0.0 -0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 N.D. -3.8 +0.1 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.8 N.D. -3.5 +0.2 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.3 N.D. -3.0 -0.1 -0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.6 N.D. -3.2 +0.0 +0.0
stress R2A with Bacitracin 0.6 mM -0.3 N.D. -3.7 +0.2 +0.1
stress R2A with Bacitracin 0.6 mM +0.1 N.D. -3.9 +0.3 -0.1
stress R2A with Lomefloxacin 0.0002 mM -0.0 N.D. -4.0 +0.2 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.0 N.D. -3.7 +0.2 -0.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 N.D. -2.7 -0.1 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -0.2 N.D. -3.2 +0.0 -0.2
stress R2A with Nitrofurantoin 0.4 mg/mL +0.1 N.D. -3.7 +0.3 -0.1
stress R2A with Cisplatin 0.0016 mM +0.1 N.D. -3.8 +0.3 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 N.D. -3.2 +0.3 -0.2
stress R2A with Nitrofurantoin 0.4 mg/mL +0.2 N.D. -3.8 +0.3 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 N.D. -2.7 +0.2 -0.6
stress R2A with chromate 0.1 mM -0.1 N.D. -3.0 +0.1 +0.3
nitrogen source DL-2-Aminobutyric (N) -0.1 N.D. +0.7 +0.5 +2.8
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