Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1014 experiments or choose conditions or try the comparative fitness browser

500 ntAtu1863 and Atu1864 are separated by 37 nucleotidesAtu1864 and Atu1865 are separated by 164 nucleotidesAtu1865 and Atu1866 are separated by 157 nucleotidesAtu1866 and Atu1867 are separated by 40 nucleotides Atu1863: Atu1863 - permease, at 1,843,422 to 1,844,315 Atu1863 Atu1864: Atu1864 - putative homoserine/homoserine lactone efflux protein, at 1,844,353 to 1,844,991 Atu1864 Atu1865: Atu1865 - hypothetical protein, at 1,845,156 to 1,845,392 Atu1865 Atu1866: Atu1866 - hypothetical protein, at 1,845,550 to 1,845,744 Atu1866 Atu1867: Atu1867 - glutamate racemase, at 1,845,785 to 1,846,606 Atu1867
Group Condition Atu1863 Atu1864 Atu1865 Atu1866 Atu1867
stress R2A with tungstate 375 mM -0.4 +0.2 -1.1 N.D. -0.4
stress R2A with Vancomycin 0.009 mM +0.1 -0.2 -0.1 N.D. -1.2
phage AgroPhage_F10 -0.7 -0.8 -0.1 N.D. +0.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -1.0 -0.3 N.D. +0.2
phage AgroPhage_D10 -0.2 -0.6 +0.3 N.D. -0.7
Atjh14 +0.5 -0.7 +0.3 N.D. -1.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 +0.1 -0.4 N.D. +0.3
stress R2A with m-arsenite 0.8 mM -0.1 +0.0 +0.7 N.D. -1.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.3 -0.6 N.D. +0.5
stress R2A with m-arsenite 0.8 mM +0.0 +0.2 +0.3 N.D. -1.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 -0.4 +0.1 N.D. -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 +0.0 +0.3 N.D. -0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.0 -0.4 N.D. +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 -0.2 -0.3 N.D. +0.4
carbon source Asolectin from soybean (C) -0.3 +0.7 +0.4 N.D. +0.1
no phage P2L5 -0.3 +1.3 +0.2 N.D. -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.6 +0.2 +0.6 N.D. -0.2
stress Timentin 6.25 ug/mL +0.3 -0.3 +0.6 N.D. +0.6
nitrogen source L-Pipecolic Acid (N) +0.0 +0.1 -0.1 N.D. +1.3
phage AgroPhage_E10 +0.7 -0.2 +0.6 N.D. +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 +0.5 +0.4 N.D. -0.1
in planta Bethi_Library_OD1.0 +0.2 +0.7 +0.4 N.D. +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.3 +0.7 +0.5 N.D. -0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.9 +0.1 N.D. +0.1
in planta Bethi_Library_OD0.5 +0.4 +0.5 +0.4 N.D. +0.2
stress Erythromycin 12.5 ug/mL +0.3 +0.2 +0.3 N.D. +0.8
nitrogen source L-Pipecolic Acid (N) +0.2 +0.2 +0.0 N.D. +1.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.9 +0.2 +0.8 N.D. -0.1
stress R2A with Ceftazidime 4 mM +0.3 +0.2 +0.3 N.D. +1.0
in planta Bethi_Library_OD0.01 +0.8 +0.3 +0.4 N.D. +0.3
remove
Atu1863
plot		 remove
Atu1864
plot		 remove
Atu1865		 remove
Atu1866
plot		 remove
Atu1867
plot