Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1857 and Atu1858 are separated by 19 nucleotidesAtu1858 and Atu1859 are separated by 64 nucleotidesAtu1859 and Atu1860 are separated by 69 nucleotidesAtu1860 and Atu1861 are separated by 451 nucleotides Atu1857: Atu1857 - inositol monophosphatase family protein, at 1,836,844 to 1,837,671 Atu1857 Atu1858: Atu1858 - hypothetical protein, at 1,837,691 to 1,838,626 Atu1858 Atu1859: Atu1859 - glutaminase A, at 1,838,691 to 1,839,620 Atu1859 Atu1860: Atu1860 - 30S ribosomal protein S4, at 1,839,690 to 1,840,307 Atu1860 Atu1861: Atu1861 - transporter, at 1,840,759 to 1,841,742 Atu1861
Group Condition Atu1857 Atu1858 Atu1859 Atu1860 Atu1861
phage AgroPhage_C10 -0.1 -1.6 -0.1 N.D. -0.5
phage AgroPhage_C04 +0.2 -1.5 +0.0 N.D. -0.3
no phage P2L5 -0.1 +0.3 -0.8 N.D. -0.7
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.4 -0.6 N.D. -0.3
nitrogen source L-Glutamine (N) +0.1 +0.1 -1.3 N.D. +0.2
nitrogen source L-Glutamine (N) +0.1 +0.1 -1.2 N.D. +0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 -0.4 -0.5 N.D. -0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.8 +0.3 N.D. -0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 -0.2 -0.9 N.D. +0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.1 -0.7 N.D. -0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +0.1 -0.7 N.D. -0.3
phage AgroPhage_F04 +0.3 +0.5 -0.5 N.D. -0.6
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +0.4 -0.5 N.D. -0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.6 +0.8 N.D. -0.2
phage AgroPhage_E10 -0.7 +0.9 -0.4 N.D. +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.4 -0.6 N.D. -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +0.5 -0.6 N.D. -0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.6 -0.7 N.D. +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 +0.2 +0.1 N.D. +0.7
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.8 -0.6 N.D. -0.1
stress R2A with m-arsenite 0.8 mM +0.4 +0.6 -0.3 N.D. +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +0.8 +0.4 N.D. -0.1
carbon source D-Galacturonic Acid (C) +0.4 +0.8 +0.0 N.D. +0.3
carbon source D-Glucuronic gamma lactone (C) +0.6 +0.4 +0.3 N.D. +0.3
carbon source D-Galacturonic Acid (C) +0.7 +0.5 +0.4 N.D. +0.2
carbon source D-Glucose-6-Phosphate (C) +0.6 +0.7 +0.3 N.D. +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.4 +0.7 N.D. +0.3
phage AgroPhage_E04 +0.6 +0.3 +1.0 N.D. -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.0 +0.6 +0.2 N.D. +0.2
nitrogen source DL-2-Aminobutyric (N) +1.9 -0.1 +1.5 N.D. +0.0
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