Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1856 and Atu1857 are separated by 30 nucleotidesAtu1857 and Atu1858 are separated by 19 nucleotidesAtu1858 and Atu1859 are separated by 64 nucleotidesAtu1859 and Atu1860 are separated by 69 nucleotides Atu1856: Atu1856 - inositol monophosphatase family protein, at 1,835,989 to 1,836,813 Atu1856 Atu1857: Atu1857 - inositol monophosphatase family protein, at 1,836,844 to 1,837,671 Atu1857 Atu1858: Atu1858 - hypothetical protein, at 1,837,691 to 1,838,626 Atu1858 Atu1859: Atu1859 - glutaminase A, at 1,838,691 to 1,839,620 Atu1859 Atu1860: Atu1860 - 30S ribosomal protein S4, at 1,839,690 to 1,840,307 Atu1860
Group Condition Atu1856 Atu1857 Atu1858 Atu1859 Atu1860
phage AgroPhage_C04 -0.5 +0.2 -1.5 +0.0 N.D.
phage AgroPhage_C10 +0.5 -0.1 -1.6 -0.1 N.D.
nitrogen source L-Glutamine (N) +0.1 +0.1 +0.1 -1.3 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 +0.6 -0.2 -0.9 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.3 +0.2 -0.8 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 +0.4 +0.1 -0.7 N.D.
phage AgroPhage_E10 -0.3 -0.7 +0.9 -0.4 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.2 -0.6 +0.8 N.D.
phage AgroPhage_D10 -0.6 +0.6 -0.1 -0.3 N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.3 -0.8 +0.3 N.D.
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.3 -0.4 -0.6 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 +0.1 +0.6 -0.7 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.6 -0.4 -0.5 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.5 +0.4 -0.6 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +0.5 +0.1 -0.7 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.4 +0.8 -0.6 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 +0.4 +0.2 +0.5 N.D.
phage AgroPhage_F04 +0.3 +0.3 +0.5 -0.5 N.D.
stress R2A with Vancomycin 0.009 mM +0.4 -0.3 -0.2 +0.7 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +0.4 +0.5 -0.6 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 -0.4 +0.7 +0.2 N.D.
carbon source L-ascorbate (C) +0.5 +0.5 +0.6 -0.2 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +0.4 +0.4 +0.7 N.D.
carbon source D-Saccharic potassium salt (C) +0.3 +0.1 +0.8 +0.3 N.D.
carbon source Melibiose (C) +0.4 +0.5 +0.4 +0.4 N.D.
phage AgroPhage_E04 -0.2 +0.6 +0.3 +1.0 N.D.
carbon source D-Glucose-6-Phosphate (C) +0.3 +0.6 +0.7 +0.3 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +1.0 +0.6 +0.2 N.D.
carbon source D-Galacturonic Acid (C) +0.5 +0.7 +0.5 +0.4 N.D.
nitrogen source DL-2-Aminobutyric (N) -0.2 +1.9 -0.1 +1.5 N.D.
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