Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1853 and Atu1854 are separated by 144 nucleotidesAtu1854 and Atu1855 are separated by 137 nucleotidesAtu1855 and Atu1856 are separated by 73 nucleotidesAtu1856 and Atu1857 are separated by 30 nucleotides Atu1853: Atu1853 - hypothetical protein, at 1,833,841 to 1,834,089 Atu1853 Atu1854: Atu1854 - glutaredoxin-related protein, at 1,834,234 to 1,834,569 Atu1854 Atu1855: Atu1855 - MFS permease, at 1,834,707 to 1,835,915 Atu1855 Atu1856: Atu1856 - inositol monophosphatase family protein, at 1,835,989 to 1,836,813 Atu1856 Atu1857: Atu1857 - inositol monophosphatase family protein, at 1,836,844 to 1,837,671 Atu1857
Group Condition Atu1853 Atu1854 Atu1855 Atu1856 Atu1857
phage AgroPhage_E10 -1.4 N.D. -0.0 -0.3 -0.7
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.9 N.D. -0.5 -0.1 -0.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.0 N.D. -0.4 +0.0 -0.5
phage AgroPhage_H04 -0.8 N.D. -0.4 -0.5 -0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 N.D. -0.1 -0.1 -0.7
lb_tomato_root LB_Tomato_root -1.1 N.D. -0.2 -0.2 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.8 N.D. +0.3 -0.1 +0.1
phage AgroPhage_A05 -0.8 N.D. -0.4 -0.3 -0.0
phage AgroPhage_H10 -1.1 N.D. -0.1 -0.4 +0.2
phage AgroPhage_C04 -0.5 N.D. -0.5 -0.5 +0.2
stress R2A with Novobiocin 0.002 mM +0.1 N.D. -1.8 +0.0 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 N.D. -0.2 -0.6 +0.4
stress R2A with Tetracycline 0.002 mM -0.3 N.D. -0.9 +0.4 -0.1
stress R2A with Fusidic 0.002 mM +0.2 N.D. -1.3 +0.2 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.8 N.D. -0.4 +0.1 +0.3
stress R2A with Novobiocin 0.002 mM +0.2 N.D. -1.2 +0.1 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.7 N.D. +0.0 -0.3 +0.5
phage AgroPhage_D10 -0.3 N.D. -0.1 -0.6 +0.6
phage AgroPhage_E04 -0.7 N.D. -0.1 -0.2 +0.6
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 N.D. -0.5 -0.4 +0.4
phage AgroPhage_H03 -0.7 N.D. +0.1 -0.1 +0.7
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 N.D. +0.8 -0.1 +0.3
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 N.D. +0.2 +0.6 +0.5
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.1 N.D. -0.0 -0.1 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 N.D. +0.3 +0.6 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.8 N.D. +0.2 -0.2 +0.3
nitrogen source DL-2-Aminobutyric (N) -0.7 N.D. +0.3 -0.2 +1.9
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 N.D. +0.4 +0.3 +0.2
carbon source D-Galacturonic Acid (C) +0.4 N.D. +0.2 +0.5 +0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.7 N.D. +0.3 +0.0 -0.1
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