Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1838 and Atu1839 are separated by 131 nucleotidesAtu1839 and Atu1840 are separated by 70 nucleotidesAtu1840 and Atu1841 are separated by 81 nucleotidesAtu1841 and Atu1842 are separated by 70 nucleotides Atu1838: Atu1838 - ABC transporter, substrate binding protein (amino acid), at 1,820,179 to 1,821,258 Atu1838 Atu1839: Atu1839 - ribulose-phosphate 3-epimerase, at 1,821,390 to 1,822,067 Atu1839 Atu1840: Atu1840 - hypothetical protein, at 1,822,138 to 1,822,644 Atu1840 Atu1841: Atu1841 - adenylosuccinate lyase, at 1,822,726 to 1,824,033 Atu1841 Atu1842: Atu1842 - hypothetical protein, at 1,824,104 to 1,824,667 Atu1842
Group Condition Atu1838 Atu1839 Atu1840 Atu1841 Atu1842
stress methyl jasmonate 5 mM -1.1 N.D. +0.1 N.D. -2.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.5 N.D. -0.3 N.D. -0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.2 N.D. -0.4 N.D. -0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.1 N.D. -0.2 N.D. -0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.7 N.D. +0.0 N.D. -0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.3 N.D. -0.0 N.D. -0.3
stress methyl jasmonate 5 mM -0.9 N.D. +0.0 N.D. -1.8
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.7 N.D. +0.4 N.D. -0.3
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.9 N.D. -0.1 N.D. -0.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.6 N.D. +0.0 N.D. +0.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.2 N.D. -0.3 N.D. -0.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -2.3 N.D. -0.1 N.D. +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -2.0 N.D. -0.1 N.D. +0.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.2 N.D. +0.3 N.D. +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.0 N.D. +0.7 N.D. -0.3
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.8 N.D. +0.1 N.D. +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.9 N.D. +0.4 N.D. +0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.6 N.D. +0.6 N.D. -0.2
stress R2A with Polymyxin B sulfate 0.00075 mM -1.2 N.D. -0.4 N.D. +0.7
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.3 N.D. +0.9 N.D. -0.1
stress Streptomycin 200 ug/mL -1.2 N.D. -0.2 N.D. +1.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.4 N.D. +0.2 N.D. -0.8
phage AgroPhage_F04 +2.7 N.D. -0.4 N.D. -0.3
phage AgroPhage_D04 +2.6 N.D. -0.2 N.D. -0.4
phage AgroPhage_E04 +2.4 N.D. -0.2 N.D. +0.0
phage AgroPhage_D10 +2.9 N.D. -0.5 N.D. -0.0
phage AgroPhage_F10 +2.6 N.D. -0.1 N.D. -0.0
phage AgroPhage_E10 +2.9 N.D. -0.3 N.D. -0.1
stress R2A with Vancomycin 0.009 mM +1.5 N.D. +0.0 N.D. +2.0
stress R2A with Vancomycin 0.009 mM +2.1 N.D. -0.1 N.D. +1.6
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