Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1815 and Atu1816 are separated by 14 nucleotidesAtu1816 and Atu1817 overlap by 11 nucleotidesAtu1817 and Atu1818 are separated by 65 nucleotidesAtu1818 and Atu1819 are separated by 202 nucleotides Atu1815: Atu1815 - HlyD family secretion protein, at 1,795,033 to 1,796,331 Atu1815 Atu1816: Atu1816 - ABC transporter, nucleotide binding/ATPase protein, at 1,796,346 to 1,797,065 Atu1816 Atu1817: Atu1817 - hypothetical protein, at 1,797,055 to 1,798,263 Atu1817 Atu1818: Atu1818 - hypothetical protein, at 1,798,329 to 1,798,619 Atu1818 Atu1819: Atu1819 - hypothetical protein, at 1,798,822 to 1,799,211 Atu1819
Group Condition Atu1815 Atu1816 Atu1817 Atu1818 Atu1819
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.2 +0.1 -1.6 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.2 -0.0 -1.2 N.D.
Atjh14 +0.1 -1.0 -0.1 -0.6 N.D.
stress Streptomycin 200 ug/mL -0.6 -0.4 -0.5 -0.2 N.D.
Atjh2 +0.1 -0.4 -0.4 -0.8 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -0.1 +0.2 -1.3 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.2 +0.1 -1.2 N.D.
phage AgroPhage_C04 -0.2 -0.2 -0.8 +0.6 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.1 +0.1 -0.9 N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 -0.8 +0.1 -0.4 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.2 +0.2 -0.9 N.D.
phage AgroPhage_E04 -0.3 -0.5 -0.2 +0.8 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -0.2 -0.1 +0.9 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.2 -0.3 +0.9 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 +0.3 -0.1 +0.9 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.0 -0.2 +0.2 +1.2 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.2 +0.5 +0.7 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.0 -0.2 +1.4 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.1 -0.6 +0.2 +1.8 N.D.
nitrogen source L-Isoleucine (N) +0.2 +0.2 +0.2 +1.0 N.D.
nitrogen source Choline chloride (N) +0.2 +0.4 +0.3 +0.6 N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.2 -0.2 +1.4 N.D.
stress R2A with Vancomycin 0.009 mM +0.5 +0.6 +0.7 -0.2 N.D.
nitrogen source L-Ornithine (N) +0.5 +0.3 +0.4 +0.5 N.D.
nophagecontrol No phage control +0.1 -0.1 +0.2 +1.3 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.2 +0.1 +0.0 +1.4 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.3 +0.1 +1.3 N.D.
stress R2A with Vancomycin 0.009 mM +0.4 +0.6 +0.5 +0.6 N.D.
nitrogen source L-Ornithine (N) +0.6 +0.5 +0.5 +0.8 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.3 +0.1 +2.3 N.D.
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