Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1808 and Atu1809 are separated by 52 nucleotidesAtu1809 and Atu1810 are separated by 269 nucleotidesAtu1810 and Atu1811 are separated by 42 nucleotidesAtu1811 and Atu1812 are separated by 181 nucleotides Atu1808: Atu1808 - UDP-glucose:ceramide glycosyltransferase, at 1,790,521 to 1,791,663 Atu1808 Atu1809: Atu1809 - tRNA-Pro, at 1,791,716 to 1,791,792 Atu1809 Atu1810: Atu1810 - hypothetical protein, at 1,792,062 to 1,792,367 Atu1810 Atu1811: Atu1811 - tRNA-Arg, at 1,792,410 to 1,792,486 Atu1811 Atu1812: Atu1812 - hypothetical protein, at 1,792,668 to 1,792,880 Atu1812
Group Condition Atu1808 Atu1809 Atu1810 Atu1811 Atu1812
stress R2A with Polymyxin B sulfate 0.00075 mM +0.1 N.D. -4.0 N.D. +0.3
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 N.D. -3.1 N.D. -0.4
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 N.D. -3.0 N.D. -0.5
carbon source Stachyose (C) -0.2 N.D. -2.6 N.D. -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 N.D. -2.9 N.D. -0.1
phage AgroPhage_F03 -0.0 N.D. -3.0 N.D. -0.4
stress R2A with cyanide 2.5 mM -0.2 N.D. -2.9 N.D. -0.3
lb_wheat LB_wheat +0.0 N.D. -3.0 N.D. -0.2
stress R2A with Cadmium chloride hemipentahydrate 0.02 mM +0.0 N.D. -3.0 N.D. -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.2 N.D. -2.5 N.D. -0.5
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 N.D. -2.8 N.D. -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.1 N.D. -3.0 N.D. -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 N.D. -3.1 N.D. +0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 N.D. -2.8 N.D. -0.2
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.2 N.D. -3.1 N.D. -0.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 N.D. -2.9 N.D. -0.4
stress Rosmarinic 5 mM -0.0 N.D. -3.1 N.D. +0.2
carbon source L-Alanine (C) +0.0 N.D. -3.1 N.D. +0.2
stress R2A with Strontium chloride 750 mM -0.0 N.D. -3.0 N.D. +0.2
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.2 N.D. -2.9 N.D. -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.0 N.D. -3.0 N.D. +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 N.D. -3.1 N.D. +0.1
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 N.D. -2.9 N.D. +0.3
phage AgroPhage_D07 +0.1 N.D. -2.8 N.D. +0.4
carbon source Asolectin from soybean (C) +0.2 N.D. -2.7 N.D. +0.3
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 N.D. -2.7 N.D. +0.2
carbon source L-ascorbate (C) -0.4 N.D. +2.6 N.D. -0.4
carbon source L-ascorbate (C) -0.2 N.D. +3.2 N.D. -0.2
phage phage 99.2 +0.4 N.D. +2.8 N.D. -0.1
phage phage 99.2 +0.3 N.D. +2.7 N.D. +0.5
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