Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1805 and Atu8166 are separated by 213 nucleotidesAtu8166 and Atu1808 are separated by 210 nucleotidesAtu1808 and Atu1809 are separated by 52 nucleotidesAtu1809 and Atu1810 are separated by 269 nucleotides Atu1805: Atu1805 - hypothetical protein, at 1,789,579 to 1,789,827 Atu1805 Atu8166: Atu8166 - hypothetical protein, at 1,790,041 to 1,790,310 Atu8166 Atu1808: Atu1808 - UDP-glucose:ceramide glycosyltransferase, at 1,790,521 to 1,791,663 Atu1808 Atu1809: Atu1809 - tRNA-Pro, at 1,791,716 to 1,791,792 Atu1809 Atu1810: Atu1810 - hypothetical protein, at 1,792,062 to 1,792,367 Atu1810
Group Condition Atu1805 Atu8166 Atu1808 Atu1809 Atu1810
stress R2A with Polymyxin B sulfate 0.00075 mM -0.4 -0.3 +0.1 N.D. -4.0
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.4 -0.2 -0.1 N.D. -3.0
phage AgroPhage_D07 -0.1 -0.7 +0.1 N.D. -2.8
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.4 -0.4 -0.2 N.D. -2.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 +0.1 -0.4 N.D. -2.9
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.6 -0.1 -0.3 N.D. -2.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.2 -1.1 +0.1 N.D. -1.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 -0.1 -0.5 N.D. -2.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -1.1 -0.3 -0.3 N.D. -1.8
carbon source Asolectin from soybean (C) -0.4 -0.6 +0.2 N.D. -2.7
carbon source trans-aconitic (C) -0.4 -0.7 -0.2 N.D. -2.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.7 +0.2 -0.1 N.D. -2.6
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -0.2 +0.1 N.D. -2.8
stress R2A with Strontium chloride 750 mM -0.3 +0.2 -0.0 N.D. -3.0
stress Rosmarinic 5 mM -0.3 +0.2 -0.0 N.D. -3.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 -0.5 -0.0 N.D. -3.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -0.3 +0.3 N.D. -2.9
carbon source Stachyose (C) -0.4 +0.2 -0.2 N.D. -2.6
stress R2A with Cadmium chloride hemipentahydrate 0.02 mM -0.2 +0.2 +0.0 N.D. -3.0
stress R2A with Cadmium chloride hemipentahydrate 0.02 mM +0.3 -0.2 -0.2 N.D. -2.7
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.0 +0.4 +0.2 N.D. -3.1
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.3 -0.0 N.D. -2.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 +0.4 +0.3 N.D. -3.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.1 +0.1 N.D. -2.8
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 -0.2 +0.3 N.D. -2.7
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.9 +0.3 N.D. -1.9
carbon source L-ascorbate (C) -0.4 -0.2 -0.4 N.D. +2.6
carbon source L-ascorbate (C) -0.4 -0.1 -0.2 N.D. +3.2
phage phage 99.2 +0.2 -0.0 +0.4 N.D. +2.8
phage Phage 95.3 + bacteria +0.3 +0.7 +0.2 N.D. +2.6
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