Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1798 and Atu8021 are separated by 155 nucleotidesAtu8021 and Atu1799 are separated by 159 nucleotidesAtu1799 and Atu1800 are separated by 133 nucleotidesAtu1800 and Atu1801 are separated by 67 nucleotides Atu1798: Atu1798 - ankyrin repeat protein, at 1,784,548 to 1,785,105 Atu1798 Atu8021: Atu8021 - hypothetical protein, at 1,785,261 to 1,785,368 Atu8021 Atu1799: Atu1799 - hypothetical protein, at 1,785,528 to 1,786,271 Atu1799 Atu1800: Atu1800 - hypothetical protein, at 1,786,405 to 1,787,559 Atu1800 Atu1801: Atu1801 - hypothetical protein, at 1,787,627 to 1,787,818 Atu1801
Group Condition Atu1798 Atu8021 Atu1799 Atu1800 Atu1801
stress R2A with Calcium Chloride Dihydrate 87.5 mM -0.2 N.D. -0.5 -0.3 -1.1
nitrogen source DL-2-Aminobutyric (N) -0.6 N.D. -0.7 -0.2 -0.6
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 N.D. -0.2 +0.3 -1.7
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 N.D. +0.5 +0.1 -1.9
stress R2A with m-arsenite 0.8 mM -0.4 N.D. +0.3 -0.1 -1.0
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 N.D. -0.4 +0.3 -0.9
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 N.D. +0.6 +0.2 -1.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 N.D. -0.4 +0.3 +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 N.D. +0.7 +0.3 +0.3
stress Erythromycin 12.5 ug/mL -0.3 N.D. +1.1 +0.3 -0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 N.D. +0.5 +0.5 -0.7
stress Chloramphenicol 12.5 ug/mL +0.5 N.D. +0.7 +0.3 -0.6
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 N.D. +0.0 +0.4 +1.0
Atjh15 +0.2 N.D. +1.0 +0.5 -0.3
phage Phage 95.3 + bacteria +0.0 N.D. -0.1 +0.7 +1.1
phage AgroPhage_D04 +0.3 N.D. +0.3 +1.1 +0.1
phage AgroPhage_C10 +0.6 N.D. +0.2 +0.4 +0.5
phage AgroPhage_E04 +0.2 N.D. +0.4 +1.1 +0.3
phage AgroPhage_F10 -0.2 N.D. +0.4 +1.3 +0.5
Atjh10 +0.5 N.D. +1.2 +0.2 +0.1
stress Erythromycin 12.5 ug/mL -0.0 N.D. +1.7 +0.4 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 N.D. +0.6 +0.2 +1.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 N.D. +0.3 +0.6 +1.6
phage AgroPhage_H10 +0.1 N.D. +0.5 +0.7 +1.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 N.D. +0.4 +0.1 +1.8
phage AgroPhage_F04 +0.2 N.D. +0.3 +1.2 +0.7
Atjh10 +0.3 N.D. +1.4 +0.5 +0.4
phage AgroPhage_D10 +0.0 N.D. +0.4 +1.1 +1.2
stress R2A with Vancomycin 0.009 mM -0.2 N.D. +3.0 +0.5 +1.0
stress R2A with Vancomycin 0.009 mM -0.1 N.D. +3.6 +0.5 +1.2
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