Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1785 and Atu1786 overlap by 4 nucleotidesAtu1786 and Atu1787 are separated by 204 nucleotidesAtu1787 and Atu1788 are separated by 206 nucleotidesAtu1788 and Atu1789 are separated by 213 nucleotides Atu1785: Atu1785 - acetyltransferase, at 1,770,246 to 1,770,749 Atu1785 Atu1786: Atu1786 - glucosamine-fructose-6-phosphate aminotransferase, at 1,770,746 to 1,772,572 Atu1786 Atu1787: Atu1787 - UDP-N-acetylglucosamine pyrophosphorylase, at 1,772,777 to 1,774,138 Atu1787 Atu1788: Atu1788 - transcriptional regulator, GntR family, at 1,774,345 to 1,775,082 Atu1788 Atu1789: Atu1789 - lipoprotein, at 1,775,296 to 1,776,369 Atu1789
Group Condition Atu1785 Atu1786 Atu1787 Atu1788 Atu1789
carbon source D-Leucrose (C) -0.3 N.D. N.D. -0.8 -0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 N.D. N.D. -0.4 -0.4
carbon source NAG (C) -0.1 N.D. N.D. -0.7 -0.4
nitrogen source 2,6-diaminopimelic (N) -0.5 N.D. N.D. -0.4 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 N.D. N.D. -0.5 -0.2
carbon source D-Leucrose (C) -0.1 N.D. N.D. -0.6 -0.4
nitrogen source L-Histidine (N) -0.4 N.D. N.D. -0.4 -0.2
nitrogen source L-Serine (N) -0.4 N.D. N.D. -0.3 -0.3
phage AgroPhage_F03 -0.7 N.D. N.D. -0.3 +0.3
carbon source Sucrose (C) +0.2 N.D. N.D. -0.5 -0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 N.D. N.D. +0.2 -0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 N.D. N.D. +0.4 -1.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 N.D. N.D. -0.5 +0.3
carbon source Methyl alpha-D-glucopyranoside (C) +0.3 N.D. N.D. -0.3 -0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 N.D. N.D. -0.2 +0.5
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 N.D. N.D. -0.1 +0.6
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 N.D. N.D. -0.4 -0.3
nitrogen source DL-2-Aminobutyric (N) +0.6 N.D. N.D. -0.3 -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 N.D. N.D. -0.1 +0.7
phage AgroPhage_F10 -0.5 N.D. N.D. -0.0 +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 N.D. N.D. +0.1 -0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 N.D. N.D. -0.5 +0.7
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.9 N.D. N.D. -0.4 +0.2
stress R2A with m-arsenite 0.8 mM -0.2 N.D. N.D. +1.3 -0.3
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 N.D. N.D. +0.3 -0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 N.D. N.D. -0.3 +0.8
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 N.D. N.D. +0.6 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 N.D. N.D. +0.0 +1.0
stress R2A with m-arsenite 0.8 mM -0.0 N.D. N.D. +1.6 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 N.D. N.D. +0.7 +0.8
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