Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1782 and Atu1783 overlap by 4 nucleotidesAtu1783 and Atu1784 are separated by 119 nucleotidesAtu1784 and Atu1785 are separated by 13 nucleotidesAtu1785 and Atu1786 overlap by 4 nucleotides Atu1782: Atu1782 - hypothetical protein, at 1,768,912 to 1,769,202 Atu1782 Atu1783: Atu1783 - hypothetical protein, at 1,769,199 to 1,769,444 Atu1783 Atu1784: Atu1784 - hypothetical protein, at 1,769,564 to 1,770,232 Atu1784 Atu1785: Atu1785 - acetyltransferase, at 1,770,246 to 1,770,749 Atu1785 Atu1786: Atu1786 - glucosamine-fructose-6-phosphate aminotransferase, at 1,770,746 to 1,772,572 Atu1786
Group Condition Atu1782 Atu1783 Atu1784 Atu1785 Atu1786
stress R2A with Vancomycin 0.009 mM -0.4 N.D. -1.3 -0.1 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.2 N.D. -0.1 -0.2 N.D.
stress R2A with Strontium chloride 750 mM -0.5 N.D. -0.6 -0.3 N.D.
nitrogen source 2,6-diaminopimelic (N) -0.3 N.D. -0.5 -0.5 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.4 N.D. -0.1 +0.3 N.D.
nitrogen source L-Histidine (N) -0.6 N.D. -0.2 -0.4 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 N.D. -0.8 +0.3 N.D.
phage AgroPhage_A07 -0.6 N.D. +0.1 -0.4 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 N.D. +0.2 -0.5 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 N.D. -0.3 +0.4 N.D.
nophagecontrol No phage control +0.4 N.D. -0.5 -0.4 N.D.
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 N.D. +0.4 -0.7 N.D.
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 N.D. -0.2 -0.6 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.6 N.D. +0.2 +0.4 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.6 N.D. -0.5 -0.1 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.0 N.D. +0.7 -0.6 N.D.
phage AgroPhage_F10 +0.6 N.D. +0.0 -0.5 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 N.D. +0.5 +0.2 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 N.D. +0.8 +0.0 N.D.
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 N.D. +0.5 +0.5 N.D.
nitrogen source DL-2-Aminobutyric (N) +0.6 N.D. -0.4 +0.6 N.D.
stress R2A with tungstate 375 mM -0.1 N.D. +0.9 +0.1 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 N.D. +0.1 +0.7 N.D.
phage AgroPhage_E10 +0.9 N.D. +0.5 -0.3 N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 N.D. +0.5 +0.4 N.D.
no phage P2L5 +0.2 N.D. +0.7 +0.4 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +1.0 N.D. +0.2 +0.2 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.0 N.D. +0.0 +0.3 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.0 N.D. +1.4 +0.1 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 N.D. -0.0 +0.9 N.D.
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