Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1769 and Atu1770 are separated by 72 nucleotidesAtu1770 and Atu1771 are separated by 98 nucleotidesAtu1771 and Atu8165 are separated by 87 nucleotidesAtu8165 and Atu1773 are separated by 100 nucleotides Atu1769: Atu1769 - nitrogen regulatory protein PII, at 1,753,834 to 1,754,172 Atu1769 Atu1770: Atu1770 - glutamine synthetase, at 1,754,245 to 1,755,654 Atu1770 Atu1771: Atu1771 - hypothetical protein, at 1,755,753 to 1,756,673 Atu1771 Atu8165: Atu8165 - hypothetical protein, at 1,756,761 to 1,757,090 Atu8165 Atu1773: Atu1773 - hypothetical protein, at 1,757,191 to 1,757,847 Atu1773
Group Condition Atu1769 Atu1770 Atu1771 Atu8165 Atu1773
carbon source D-Galacturonic Acid (C) N.D. -1.8 +0.2 -0.7 N.D.
nophagecontrol No phage control N.D. -0.8 -0.0 -1.4 N.D.
carbon source D-Saccharic potassium salt (C) N.D. -1.6 +0.0 -0.2 N.D.
carbon source D-Galacturonic Acid (C) N.D. -1.7 +0.0 -0.0 N.D.
carbon source Ethyl benzoate (C) N.D. -1.0 -0.2 -0.5 N.D.
stress R2A with Polymyxin B sulfate 0.00075 mM N.D. -0.3 -0.6 -0.7 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.7 -0.0 -0.9 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. -0.7 +0.1 -1.0 N.D.
carbon source 2-6-dihydroxybenzoic (C) N.D. -0.5 -0.1 -0.9 N.D.
carbon source Dihydroxyacetone (C) N.D. -0.9 -0.2 -0.4 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.7 -0.0 -0.8 N.D.
stress R2A with m-arsenite 0.8 mM N.D. -1.2 +0.0 -0.3 N.D.
carbon source Maltotriose (C) N.D. -1.0 +0.0 -0.5 N.D.
stress R2A with m-arsenite 0.8 mM N.D. -1.3 +0.1 -0.1 N.D.
carbon source D-Mannitol (C) N.D. -1.1 +0.1 -0.3 N.D.
carbon source Xylobiose (C) N.D. -1.0 +0.2 -0.4 N.D.
carbon source Stachyose (C) N.D. -0.7 +0.2 -0.7 N.D.
nitrogen source L-Leucine (N) N.D. -1.3 -0.0 +0.2 N.D.
carbon source D-Saccharic potassium salt (C) N.D. -1.3 +0.1 +0.3 N.D.
stress R2A with Vancomycin 0.009 mM N.D. +0.6 -0.4 -0.8 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.5 +0.7 -0.5 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.2 +0.7 -0.8 N.D.
carbon source NAG (C) N.D. -0.8 +0.2 +0.4 N.D.
stress Erythromycin 12.5 ug/mL N.D. +0.8 -0.2 -0.5 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.7 +0.5 +0.5 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.1 +0.1 +1.2 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.6 +0.6 +1.4 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.0 +0.4 +1.2 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.6 +0.1 +2.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. -0.3 +0.8 +2.0 N.D.
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