Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1767 and Atu1768 are separated by 84 nucleotidesAtu1768 and Atu1769 are separated by 358 nucleotidesAtu1769 and Atu1770 are separated by 72 nucleotidesAtu1770 and Atu1771 are separated by 98 nucleotides Atu1767: Atu1767 - transcriptional regulator, AraC family, at 1,750,875 to 1,751,915 Atu1767 Atu1768: Atu1768 - hypothetical protein, at 1,752,000 to 1,753,475 Atu1768 Atu1769: Atu1769 - nitrogen regulatory protein PII, at 1,753,834 to 1,754,172 Atu1769 Atu1770: Atu1770 - glutamine synthetase, at 1,754,245 to 1,755,654 Atu1770 Atu1771: Atu1771 - hypothetical protein, at 1,755,753 to 1,756,673 Atu1771
Group Condition Atu1767 Atu1768 Atu1769 Atu1770 Atu1771
nitrogen source Betaine (N) -3.0 -0.0 N.D. -0.2 -0.1
nitrogen source Betaine (N) -2.8 -0.1 N.D. -0.2 -0.1
nitrogen source Choline chloride (N) -2.9 -0.1 N.D. -0.0 -0.0
nitrogen source Choline chloride (N) -2.9 +0.0 N.D. +0.1 +0.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.1 +0.2 N.D. +0.1 -0.1
carbon source D-Galacturonic Acid (C) -0.2 +0.0 N.D. -1.7 +0.0
carbon source D-Galacturonic Acid (C) -0.0 -0.1 N.D. -1.8 +0.2
carbon source D-Saccharic potassium salt (C) -0.1 -0.0 N.D. -1.6 +0.0
carbon source D-Saccharic potassium salt (C) -0.2 -0.0 N.D. -1.3 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.6 +0.1 N.D. -0.1 +0.2
nitrogen source L-Leucine (N) +0.1 -0.2 N.D. -1.3 -0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -1.3 +0.1 N.D. -0.1 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -1.4 +0.1 N.D. -0.1 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.2 +0.1 N.D. +0.1 -0.1
stress R2A with Vancomycin 0.009 mM -1.4 +0.1 N.D. +0.4 -0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.3 +0.0 N.D. -0.1 +0.4
stress R2A with Vancomycin 0.009 mM -1.5 +0.2 N.D. +0.6 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +0.2 N.D. -0.6 -0.7
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.4 +0.1 N.D. -0.0 +0.3
stress R2A with m-arsenite 0.8 mM +0.2 +0.1 N.D. -1.3 +0.1
stress R2A with m-arsenite 0.8 mM +0.3 +0.1 N.D. -1.2 +0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.2 +0.0 N.D. +0.2 +0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.0 +0.2 N.D. -0.2 +0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 -0.1 N.D. -0.5 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -0.0 N.D. -0.6 +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.8 +0.0 N.D. -0.2 +0.7
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.0 +0.5 N.D. +0.2 +0.3
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.2 N.D. -0.6 +0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.5 N.D. -0.5 +0.7
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.3 N.D. +0.4 +0.7
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