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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu1765 and Atu1766 are separated by 277 nucleotides
Atu1766 and Atu1767 are separated by 271 nucleotides
Atu1767 and Atu1768 are separated by 84 nucleotides
Atu1768 and Atu1769 are separated by 358 nucleotides
Atu1765: Atu1765 - transcriptional regulator, LysR family, at 1,749,211 to 1,750,107
Atu1765
Atu1766: Atu1766 - hypothetical protein, at 1,750,385 to 1,750,603
Atu1766
Atu1767: Atu1767 - transcriptional regulator, AraC family, at 1,750,875 to 1,751,915
Atu1767
Atu1768: Atu1768 - hypothetical protein, at 1,752,000 to 1,753,475
Atu1768
Atu1769: Atu1769 - nitrogen regulatory protein PII, at 1,753,834 to 1,754,172
Atu1769
Group
Condition
Atu1765
Atu1766
Atu1767
Atu1768
Atu1769
nitrogen source
Choline chloride (N)
-0.8
-0.7
-2.9
+0.0
N.D.
nitrogen source
Choline chloride (N)
-0.6
-0.4
-2.9
-0.1
N.D.
nitrogen source
Betaine (N)
-0.4
-0.5
-2.8
-0.1
N.D.
nitrogen source
Betaine (N)
-0.2
-0.2
-3.0
-0.0
N.D.
phage
AgroPhage_C04
+0.0
-1.5
-0.6
-0.0
N.D.
in planta
Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.0
-0.1
-2.1
+0.2
N.D.
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.3
-0.2
-1.3
+0.0
N.D.
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.0
-0.2
-1.6
+0.1
N.D.
lb_sorghum_leaf
LB_sorghum_leaf
-0.1
-0.1
-1.2
-0.1
N.D.
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.2
-0.4
-1.4
+0.1
N.D.
in planta
Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.0
-0.2
-1.2
+0.1
N.D.
in planta
Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.2
-0.4
-0.8
+0.2
N.D.
nitrogen source
DL-2-Aminobutyric (N)
-0.7
-0.6
+0.1
+0.0
N.D.
stress
R2A with Vancomycin 0.009 mM
+0.2
-0.0
-1.4
+0.1
N.D.
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.4
-0.4
-0.5
+0.2
N.D.
in planta
Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days
+0.3
-0.1
-1.3
+0.1
N.D.
stress
R2A with Vancomycin 0.009 mM
+0.1
+0.2
-1.5
+0.2
N.D.
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.0
-0.4
-1.0
+0.5
N.D.
in planta
Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.2
-0.3
-0.7
+0.2
N.D.
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.1
-0.5
-0.6
+0.2
N.D.
in planta
Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days
+0.3
+0.4
-1.4
+0.1
N.D.
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
-0.7
+0.5
-0.2
N.D.
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.2
+0.3
-1.0
+0.2
N.D.
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.3
-0.8
-0.3
+0.5
N.D.
in planta
Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.3
-0.8
+0.3
+0.0
N.D.
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.4
+0.2
-0.8
+0.2
N.D.
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
+0.3
+0.5
-0.5
-0.2
N.D.
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.4
+0.4
-0.6
-0.1
N.D.
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
+0.8
-0.5
+0.2
N.D.
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
+1.2
-0.1
+0.3
N.D.
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