Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1757 and Atu1758 are separated by 256 nucleotidesAtu1758 and Atu1759 are separated by 65 nucleotidesAtu1759 and Atu1760 are separated by 93 nucleotidesAtu1760 and Atu8164 are separated by 269 nucleotides Atu1757: Atu1757 - hypothetical protein, at 1,742,384 to 1,742,992 Atu1757 Atu1758: Atu1758 - hypothetical protein, at 1,743,249 to 1,743,683 Atu1758 Atu1759: Atu1759 - L-serine dehydratase, at 1,743,749 to 1,745,152 Atu1759 Atu1760: Atu1760 - hypothetical protein, at 1,745,246 to 1,745,536 Atu1760 Atu8164: Atu8164 - hypothetical protein, at 1,745,806 to 1,746,156 Atu8164
Group Condition Atu1757 Atu1758 Atu1759 Atu1760 Atu8164
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -0.3 +0.0 -3.8 +0.4
nitrogen source Betaine (N) -0.4 -0.0 -3.1 -0.7 -0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +0.5 -0.5 -4.1 +0.4
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.1 +0.0 -4.1 +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.1 -0.0 -4.3 +0.2
phage phage 99.2 +0.1 -0.2 -0.1 -3.3 -0.0
nitrogen source L-Serine (N) -0.1 -0.1 -2.4 -0.4 -0.0
nitrogen source Betaine (N) -0.3 +0.1 -3.0 +0.1 -0.1
nitrogen source L-Serine (N) -0.3 -0.0 -3.1 +0.5 -0.1
stress R2A with Gentamicin 0.00125 mM -0.4 +0.0 -1.0 -1.4 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 -0.2 -0.6 -1.8 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 -0.2 -0.2 -1.8 -0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.1 -0.3 -2.2 +0.2
nitrogen source Glycine (N) +0.0 -0.3 -2.2 -0.0 +0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.1 -0.2 -1.8 +0.1
nitrogen source Choline chloride (N) -0.3 -0.3 -2.0 +0.4 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 +0.2 -0.9 -1.3 +0.7
phage AgroPhage_A07 +0.2 +0.4 -0.3 -2.3 +0.0
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -0.1 +0.3 -2.4 -0.2
nitrogen source Glycine (N) -0.0 -0.0 -1.9 +0.4 -0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.1 -0.5 -1.4 -0.1
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -0.1 +0.4 -1.7 +0.1
phage AgroPhage_E10 -0.6 +0.5 +0.7 -1.6 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +0.3 -0.4 -1.3 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.2 -0.5 +1.2 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.6 +0.4 -0.5 +0.7 +0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -0.5 -0.1 +1.6 +0.3
nitrogen source L-Histidine (N) -0.2 -0.0 +1.7 +0.6 -0.2
stress R2A with Vancomycin 0.009 mM +0.6 +0.1 +0.2 +2.1 -0.3
nitrogen source DL-2-Aminobutyric (N) -0.8 +0.5 +8.3 -1.6 +0.5
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