Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1741 and Atu1742 are separated by 263 nucleotidesAtu1742 and Atu1743 are separated by 105 nucleotidesAtu1743 and Atu1744 overlap by 1 nucleotidesAtu1744 and Atu1745 are separated by 109 nucleotides Atu1741: Atu1741 - hypothetical protein, at 1,728,149 to 1,728,562 Atu1741 Atu1742: Atu1742 - hypothetical protein, at 1,728,826 to 1,729,980 Atu1742 Atu1743: Atu1743 - hypothetical protein, at 1,730,086 to 1,730,703 Atu1743 Atu1744: Atu1744 - nitroreductase family protein, at 1,730,703 to 1,731,284 Atu1744 Atu1745: Atu1745 - hypothetical protein, at 1,731,394 to 1,732,374 Atu1745
Group Condition Atu1741 Atu1742 Atu1743 Atu1744 Atu1745
stress syringaldehyde 1.25 mM -0.2 -0.6 -0.1 -0.6 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.8 +0.2 -0.4 -0.1 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.7 -0.3 -0.1 +0.3 N.D.
phage AgroPhage_E10 -0.9 +0.2 +0.3 +0.1 N.D.
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.5 +0.4 -0.8 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.4 +0.7 -0.6 N.D.
phage AgroPhage_F04 -0.8 +0.4 +0.2 +0.1 N.D.
phage AgroPhage_A07 -0.4 +0.5 +0.4 -0.4 N.D.
phage AgroPhage_D10 -0.6 +0.6 +0.2 -0.2 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.9 +0.2 +0.5 +0.3 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -0.0 -0.1 +0.9 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 -0.3 +0.1 +1.2 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 +0.4 +0.2 +0.4 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 -0.2 +0.2 +1.1 N.D.
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 -0.5 +0.3 -0.0 N.D.
phage AgroPhage_E04 -0.3 +0.3 -0.1 +0.7 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -0.4 +0.5 +1.0 N.D.
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.2 -0.0 +0.9 N.D.
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.1 +0.5 +0.7 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 -0.0 -0.2 +0.5 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.9 -0.2 +0.1 +0.3 N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 -0.2 +0.1 +0.8 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 -0.1 +0.7 +0.1 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -0.2 -0.2 +1.2 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.9 +0.0 +0.1 +0.4 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.5 +0.1 +0.5 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.8 +0.3 +0.1 N.D.
nitrogen source DL-2-Aminobutyric (N) -0.0 +0.8 +0.2 +1.0 N.D.
stress R2A with Vancomycin 0.009 mM +0.1 +2.1 +0.2 +0.2 N.D.
stress R2A with Vancomycin 0.009 mM +0.8 +2.8 -0.2 +0.0 N.D.
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