Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1731 and Atu1733 are separated by 665 nucleotidesAtu1733 and Atu1734 are separated by 153 nucleotidesAtu1734 and Atu1735 are separated by 57 nucleotidesAtu1735 and Atu1736 are separated by 6 nucleotides Atu1731: Atu1731 - xanthine-guanine phosphoribosyltransferase, at 1,716,161 to 1,716,658 Atu1731 Atu1733: Atu1733 - ribonucleoside-diphosphate reductase 2 alpha chain, at 1,717,324 to 1,721,142 Atu1733 Atu1734: Atu1734 - hypothetical protein, at 1,721,296 to 1,721,643 Atu1734 Atu1735: Atu1735 - hypothetical protein, at 1,721,701 to 1,721,988 Atu1735 Atu1736: Atu1736 - manganese transport protein, at 1,721,995 to 1,723,365 Atu1736
Group Condition Atu1731 Atu1733 Atu1734 Atu1735 Atu1736
phage AgroPhage_E04 -0.5 N.D. -0.8 -0.3 -0.4
stress R2A with Zinc chloride 0.05 mM +0.1 N.D. +0.1 +0.0 -2.1
stress R2A with Zinc chloride 0.05 mM -0.1 N.D. +0.2 -0.0 -1.5
r2a control R2A control -0.3 N.D. -0.8 +0.1 -0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 N.D. -0.8 -0.5 -0.2
phage AgroPhage_D10 -0.1 N.D. +0.6 -0.2 -0.9
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 N.D. -0.7 -0.3 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 N.D. +0.3 -0.6 +0.2
phage AgroPhage_H03 -0.3 N.D. +0.5 -0.1 -0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.4 N.D. +0.3 -0.6 -0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 N.D. +0.5 -0.7 -0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.0 N.D. +0.7 -0.5 -0.4
no phage P3L4 +0.4 N.D. -0.8 -0.0 +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 N.D. +0.4 -0.2 -0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 N.D. +0.7 -0.4 -0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 N.D. -0.5 +1.3 -0.1
nitrogen source DL-2-Aminobutyric (N) -0.3 N.D. +0.9 -1.1 +1.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.8 N.D. +0.4 -0.3 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.0 N.D. +0.5 +0.1 -0.8
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 N.D. -0.0 -0.3 +0.4
stress R2A with Vancomycin 0.009 mM +0.7 N.D. -0.2 +0.7 -0.2
phage AgroPhage_E10 +0.2 N.D. +0.8 +0.4 -0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 N.D. -0.3 +0.1 +0.7
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 N.D. +1.5 +0.3 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 N.D. +0.7 +0.1 +0.3
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 N.D. +0.2 +0.5 +0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.1 N.D. +0.8 -0.1 -0.1
phage AgroPhage_D04 +0.8 N.D. +0.9 -0.0 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 N.D. +0.8 +0.2 +0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 N.D. +2.2 -0.5 +0.6
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