Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1729 and Atu1730 are separated by 87 nucleotidesAtu1730 and Atu1731 are separated by 126 nucleotidesAtu1731 and Atu1733 are separated by 665 nucleotidesAtu1733 and Atu1734 are separated by 153 nucleotides Atu1729: Atu1729 - putative molybdenum cofactor biosynthesis protein, at 1,714,310 to 1,715,101 Atu1729 Atu1730: Atu1730 - hypothetical protein, at 1,715,189 to 1,716,034 Atu1730 Atu1731: Atu1731 - xanthine-guanine phosphoribosyltransferase, at 1,716,161 to 1,716,658 Atu1731 Atu1733: Atu1733 - ribonucleoside-diphosphate reductase 2 alpha chain, at 1,717,324 to 1,721,142 Atu1733 Atu1734: Atu1734 - hypothetical protein, at 1,721,296 to 1,721,643 Atu1734
Group Condition Atu1729 Atu1730 Atu1731 Atu1733 Atu1734
r2a control R2A control -0.2 -0.3 -0.3 N.D. -0.8
carbon source m-Inositol (C) -1.4 +0.0 +0.1 N.D. -0.1
carbon source m-Inositol (C) -1.6 +0.1 +0.1 N.D. +0.2
no phage P2L5 -0.4 -0.2 +0.3 N.D. -0.9
carbon source D-Saccharic potassium salt (C) -0.3 +0.2 +0.1 N.D. -1.0
phage AgroPhage_E04 +0.1 +0.2 -0.5 N.D. -0.8
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 -0.5 -0.9 N.D. -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 -0.8 -0.1 N.D. -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.3 -0.5 N.D. +0.5
phage AgroPhage_F04 -0.6 -0.6 +0.4 N.D. +0.4
phage AgroPhage_C10 -1.1 -0.3 +0.2 N.D. +0.8
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +0.6 -0.4 N.D. -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 -0.4 -0.4 N.D. -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.5 +0.7 N.D. -0.8
phage AgroPhage_A07 -0.4 -0.3 +0.5 N.D. +0.4
phage AgroPhage_D04 -1.0 -0.4 +0.8 N.D. +0.9
phage phage 100.2 +0.7 +0.1 +0.4 N.D. -0.6
phage AgroPhage_D10 -0.5 +0.7 -0.1 N.D. +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 +0.1 +0.4 N.D. +0.7
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 +0.2 +0.6 N.D. +0.6
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.3 -0.1 N.D. +1.0
phage AgroPhage_B07 -0.5 +0.4 +0.2 N.D. +0.7
phage AgroPhage_E10 +0.3 -0.3 +0.2 N.D. +0.8
stress R2A with Tetracycline 0.002 mM +0.6 +0.3 +0.6 N.D. -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 +0.1 +1.1 N.D. +0.8
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 +0.4 +1.0 N.D. +0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.1 -0.2 N.D. +1.5
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 +0.4 +0.2 N.D. +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +0.8 +0.3 N.D. +0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.4 +0.3 N.D. +2.2
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