Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1727 and Atu1728 are separated by 11 nucleotidesAtu1728 and Atu1729 are separated by 276 nucleotidesAtu1729 and Atu1730 are separated by 87 nucleotidesAtu1730 and Atu1731 are separated by 126 nucleotides Atu1727: Atu1727 - hypothetical protein, at 1,713,171 to 1,713,422 Atu1727 Atu1728: Atu1728 - TrpR binding protein WrbA, at 1,713,434 to 1,714,033 Atu1728 Atu1729: Atu1729 - putative molybdenum cofactor biosynthesis protein, at 1,714,310 to 1,715,101 Atu1729 Atu1730: Atu1730 - hypothetical protein, at 1,715,189 to 1,716,034 Atu1730 Atu1731: Atu1731 - xanthine-guanine phosphoribosyltransferase, at 1,716,161 to 1,716,658 Atu1731
Group Condition Atu1727 Atu1728 Atu1729 Atu1730 Atu1731
carbon source m-Inositol (C) -0.2 -0.1 -1.6 +0.1 +0.1
carbon source m-Inositol (C) -0.1 -0.3 -1.4 +0.0 +0.1
phage AgroPhage_C10 -0.5 +0.2 -1.1 -0.3 +0.2
phage AgroPhage_F04 +0.0 -0.2 -0.6 -0.6 +0.4
phage AgroPhage_D04 +0.2 -0.2 -1.0 -0.4 +0.8
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.9 -0.1 +0.7 +0.1 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -0.1 -0.6 +0.7 +0.0
stress R2A with Vancomycin 0.009 mM -0.6 +0.1 -0.1 -0.3 +0.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.8 +0.1 +0.3 +0.5 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 +0.1 +0.6 -0.5 -0.9
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 +0.7 +0.2 -0.1 -0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.4 -0.9 +0.1 +0.1
phage AgroPhage_F10 +0.9 -0.3 -0.3 +0.2 -0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 -0.3 +0.7 -0.4 -0.4
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.1 +0.8 -0.5 +0.1
phage AgroPhage_D10 +0.6 -0.1 -0.5 +0.7 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 +0.2 -0.4 +0.6 -0.4
phage phage 100.2 -0.4 +0.1 +0.7 +0.1 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 +0.3 -0.5 +0.1 +0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.0 +0.1 +0.3 +0.0 -0.4
phage AgroPhage_E10 +1.0 -0.2 +0.3 -0.3 +0.2
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.3 +0.0 +0.2 +0.2 -0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +0.4 +0.4 +0.5 -0.3
carbon source L-Sorbose (C) +0.2 -0.2 +1.4 -0.1 +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 -0.1 -0.5 +0.4 +1.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 +0.3 -0.6 +0.1 +1.1
stress R2A with Tetracycline 0.002 mM +0.1 -0.1 +0.6 +0.3 +0.6
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 +0.2 -0.2 +0.7 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 +0.3 -0.2 +0.5 +0.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.3 +0.0 -0.1 +0.5 +0.5
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